RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ECE2O60344 883 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 DDAH1O94760 285 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 KIAA2012Q0VF49 1180 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 FAM47AQ5JRC9 791 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 TRIM22Q8IYM9 498 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 NUP133Q8WUM0 1156 aa25.6■■□□□ 1.69
PTPN13-205ENST00000502971 TFIP11Q9UBB9 837 aaKnown RBP25.6■■□□□ 1.69
PTPN13-205ENST00000502971 F8W031 263 aaPredicted RBP25.59■■□□□ 1.69
PTPN13-205ENST00000502971 LEO1Q8WVC0 666 aaPredicted RBP25.59■■□□□ 1.69
PTPN13-205ENST00000502971 RBM28Q9NW13 759 aaKnown RBP25.59■■□□□ 1.69
PTPN13-205ENST00000502971 SAP30BPQ9UHR5 308 aaKnown RBP25.59■■□□□ 1.69
PTPN13-205ENST00000502971 PLCD1P51178 756 aa25.58■■□□□ 1.69
PTPN13-205ENST00000502971 BRAPQ7Z569 592 aa25.58■■□□□ 1.69
PTPN13-205ENST00000502971 TEKT1Q969V4 418 aa25.58■■□□□ 1.69
PTPN13-205ENST00000502971 DYNLL2Q96FJ2 89 aa25.58■■□□□ 1.69
PTPN13-205ENST00000502971 MXD3Q9BW11 206 aa25.58■■□□□ 1.69
PTPN13-205ENST00000502971 SLC26A6Q9BXS9 759 aa25.58■■□□□ 1.69
PTPN13-205ENST00000502971 FOCADQ5VW36 1801 aa25.58■■□□□ 1.68
PTPN13-205ENST00000502971 MYH15Q9Y2K3 1946 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 TFAP4Q01664 338 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 SLC4A8Q2Y0W8 1093 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 ZNF444Q8N0Y2 327 aaPredicted RBP25.57■■□□□ 1.68
PTPN13-205ENST00000502971 CRACR2BQ8N4Y2 399 aaPredicted RBP25.57■■□□□ 1.68
PTPN13-205ENST00000502971 TCP11L1Q9NUJ3 509 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 C21orf2O43822 256 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 TROAPQ12815 778 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 DALRD3Q5D0E6 543 aaKnown RBP25.57■■□□□ 1.68
PTPN13-205ENST00000502971 DACT2Q5SW24 774 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 OTUD7BQ6GQQ9 843 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 C16orf86Q6ZW13 317 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 NBPF11Q86T75 865 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 DGKHQ86XP1 1220 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 RTKN2Q8IZC4 609 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 KLHL34Q8N239 644 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 ANKS1AQ92625 1134 aa25.57■■□□□ 1.68
PTPN13-205ENST00000502971 USP17L3A6NCW0 530 aa25.56■■□□□ 1.68
PTPN13-205ENST00000502971 USP17L4A6NCW7 530 aa25.56■■□□□ 1.68
PTPN13-205ENST00000502971 HDLBPQ00341 1268 aaKnown RBP25.56■■□□□ 1.68
PTPN13-205ENST00000502971 TRIM29Q14134 588 aa25.56■■□□□ 1.68
PTPN13-205ENST00000502971 AOC3Q16853 763 aa25.56■■□□□ 1.68
PTPN13-205ENST00000502971 CCDC93Q567U6 631 aa25.56■■□□□ 1.68
PTPN13-205ENST00000502971 USP17L1Q7RTZ2 530 aa25.56■■□□□ 1.68
PTPN13-205ENST00000502971 DEXIO95424 95 aa25.55■■□□□ 1.68
PTPN13-205ENST00000502971 MRE11P49959 708 aa25.55■■□□□ 1.68
PTPN13-205ENST00000502971 KCNQ5Q9NR82 932 aa25.55■■□□□ 1.68
PTPN13-205ENST00000502971 NMT2O60551 498 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 KIF23Q02241 960 aaPredicted RBP25.54■■□□□ 1.68
PTPN13-205ENST00000502971 KRT40Q6A162 431 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 GAS2L3Q86XJ1 694 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 AIFM3Q96NN9 605 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 RNF26Q9BY78 433 aaPredicted RBP25.54■■□□□ 1.68
PTPN13-205ENST00000502971 USP40Q9NVE5 1235 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 TSPY3P0CV98 308 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 TSPY8P0CW00 308 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 CDK8P49336 464 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 SCNN1DP51172 638 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 CCDC183Q5T5S1 534 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 ZDHHC15Q96MV8 337 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 PSMD1Q99460 953 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 RCOR1Q9UKL0 485 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 MYH1P12882 1939 aa25.54■■□□□ 1.68
PTPN13-205ENST00000502971 ZNF646O15015 1829 aaPredicted RBP25.53■■□□□ 1.68
PTPN13-205ENST00000502971 ECM29Q5VYK3 1845 aa25.53■■□□□ 1.68
PTPN13-205ENST00000502971 GOLGA6L4A6NEF3 574 aa25.53■■□□□ 1.68
PTPN13-205ENST00000502971 RASA1P20936 1047 aa25.53■■□□□ 1.68
PTPN13-205ENST00000502971 CRKP46108 304 aa25.53■■□□□ 1.68
PTPN13-205ENST00000502971 RCSD1Q6JBY9 416 aa25.53■■□□□ 1.68
PTPN13-205ENST00000502971 IL17RBQ9NRM6 502 aa25.53■■□□□ 1.68
PTPN13-205ENST00000502971 BRCA1P38398 1863 aaKnown RBP25.53■■□□□ 1.68
PTPN13-205ENST00000502971 PPIP5K2O43314 1243 aa25.52■■□□□ 1.68
PTPN13-205ENST00000502971 WDHD1O75717 1129 aaPredicted RBP25.52■■□□□ 1.68
PTPN13-205ENST00000502971 APOBEC3HQ6NTF7 200 aaKnown RBP25.52■■□□□ 1.68
PTPN13-205ENST00000502971 CTCFLQ8NI51 663 aaPredicted RBP25.52■■□□□ 1.68
PTPN13-205ENST00000502971 MAP3K14Q99558 947 aa25.52■■□□□ 1.68
PTPN13-205ENST00000502971 GJB4Q9NTQ9 266 aa25.52■■□□□ 1.68
PTPN13-205ENST00000502971 LETM1O95202 739 aaPredicted RBP25.51■■□□□ 1.68
PTPN13-205ENST00000502971 CDC42EP5Q6NZY7 148 aa25.51■■□□□ 1.68
PTPN13-205ENST00000502971 SLC44A5Q8NCS7 719 aa25.51■■□□□ 1.68
PTPN13-205ENST00000502971 USP28Q96RU2 1077 aa25.51■■□□□ 1.68
PTPN13-205ENST00000502971 KAT14Q9H8E8 782 aa25.51■■□□□ 1.68
PTPN13-205ENST00000502971 GRPEL1Q9HAV7 217 aa25.51■■□□□ 1.68
PTPN13-205ENST00000502971 AKAP17AQ02040 695 aaKnown RBP25.51■■□□□ 1.67
PTPN13-205ENST00000502971 LRSAM1Q6UWE0 723 aa25.51■■□□□ 1.67
PTPN13-205ENST00000502971 VPS33BQ9H267 617 aa25.51■■□□□ 1.67
PTPN13-205ENST00000502971 SCN9AQ15858 1988 aa25.5■■□□□ 1.67
PTPN13-205ENST00000502971 PRPF3O43395 683 aaKnown RBP25.5■■□□□ 1.67
PTPN13-205ENST00000502971 FUT2Q10981 343 aa25.5■■□□□ 1.67
PTPN13-205ENST00000502971 PICALMQ13492 652 aa25.5■■□□□ 1.67
PTPN13-205ENST00000502971 TMTC3Q6ZXV5 915 aa25.5■■□□□ 1.67
PTPN13-205ENST00000502971 KIAA0825Q8IV33 1275 aa25.5■■□□□ 1.67
PTPN13-205ENST00000502971 FHDC1Q9C0D6 1143 aaPredicted RBP25.5■■□□□ 1.67
PTPN13-205ENST00000502971 RTEL1Q9NZ71 1219 aa25.5■■□□□ 1.67
PTPN13-205ENST00000502971 PSME4Q14997 1843 aa25.5■■□□□ 1.67
PTPN13-205ENST00000502971 SYCE3A1L190 88 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 GUCY1A2P33402 732 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 MYSM1Q5VVJ2 828 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 NEDD1Q8NHV4 660 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 SERPINA10Q9UK55 444 aa25.49■■□□□ 1.67
PTPN13-205ENST00000502971 KIF28PB7ZC32 967 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms