RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 CHMP4BP1P59074 171 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 GUCY1B3Q02153 619 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 KIF23Q02241 960 aaPredicted RBP6.48□□□□□ -1.37
PHC3-217ENST00000497658 MPRIPQ6WCQ1 1025 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 CCDC129Q6ZRS4 1044 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 TRIML1Q8N9V2 468 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 MLKLQ8NB16 471 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 MSANTD4Q8NCY6 345 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.48□□□□□ -1.37
PHC3-217ENST00000497658 KIFC2Q96AC6 838 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 PANX2Q96RD6 677 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 ZCCHC17Q9NP64 241 aaKnown RBP6.48□□□□□ -1.37
PHC3-217ENST00000497658 PAG1Q9NWQ8 432 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 RSPH14Q9UHP6 348 aa6.48□□□□□ -1.37
PHC3-217ENST00000497658 MARF1Q9Y4F3 1742 aaKnown RBP6.48□□□□□ -1.37
PHC3-217ENST00000497658 KIF5CO60282 957 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 CDKL5O76039 1030 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 LMAN1P49257 510 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 IMMTQ16891 758 aaKnown RBP6.47□□□□□ -1.37
PHC3-217ENST00000497658 BEND6Q5SZJ8 279 aaPredicted RBP6.47□□□□□ -1.37
PHC3-217ENST00000497658 NT5DC1Q5TFE4 455 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 RESP18Q5W5W9 173 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 DDX46Q7L014 1031 aaKnown RBP6.47□□□□□ -1.37
PHC3-217ENST00000497658 ARHGEF25Q86VW2 580 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 NUTM2AQ8IVF1 878 aaPredicted RBP6.47□□□□□ -1.37
PHC3-217ENST00000497658 USHBP1Q8N6Y0 703 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 TC2NQ8N9U0 490 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 KLHDC4Q8TBB5 520 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 ENOX1Q8TC92 643 aaKnown RBP6.47□□□□□ -1.37
PHC3-217ENST00000497658 CCDC34Q96HJ3 373 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 WDR24Q96S15 920 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 DBNDD2Q9BQY9 259 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 BRMS1Q9HCU9 246 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 MED4Q9NPJ6 270 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 ATG3Q9NT62 314 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 FANCLQ9NW38 375 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 CDC23Q9UJX2 597 aa6.47□□□□□ -1.37
PHC3-217ENST00000497658 RRP15Q9Y3B9 282 aaKnown RBP6.47□□□□□ -1.37
PHC3-217ENST00000497658 PHRF1Q9P1Y6 1649 aaKnown RBP6.47□□□□□ -1.37
PHC3-217ENST00000497658 LAMA4Q16363 1823 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 SPEF2Q9C093 1822 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 A0A1B0GUL7 405 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 RNF113AO15541 343 aaKnown RBP6.46□□□□□ -1.37
PHC3-217ENST00000497658 CUTAO60888 179 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 ZFYP08048 801 aaPredicted RBP6.46□□□□□ -1.37
PHC3-217ENST00000497658 ZNF18P17022 549 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 LTKP29376 864 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 MAGEA9P43362 315 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 PIP4K2BP78356 416 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 HSP90B2PQ58FF3 399 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 KANK3Q6NY19 840 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 CPLX2Q6PUV4 134 aaKnown RBP6.46□□□□□ -1.37
PHC3-217ENST00000497658 NFATC2IPQ8NCF5 419 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 CCDC12Q8WUD4 166 aaPredicted RBP6.46□□□□□ -1.37
PHC3-217ENST00000497658 DPF2Q92785 391 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 WDR70Q9NW82 654 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 MYO1AQ9UBC5 1043 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 L1RE1Q9UN81 338 aa6.46□□□□□ -1.37
PHC3-217ENST00000497658 PLEKHG2Q9H7P9 1386 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 WDHD1O75717 1129 aaPredicted RBP6.46□□□□□ -1.38
PHC3-217ENST00000497658 SNRPBP14678 240 aaKnown RBP6.46□□□□□ -1.38
PHC3-217ENST00000497658 MCM3P25205 808 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 ERCC5P28715 1186 aaPredicted RBP6.46□□□□□ -1.38
PHC3-217ENST00000497658 NOP2P46087 812 aaKnown RBP6.46□□□□□ -1.38
PHC3-217ENST00000497658 AIMP1Q12904 312 aaKnown RBP6.46□□□□□ -1.38
PHC3-217ENST00000497658 PTGDRQ13258 359 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 MLECQ14165 292 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 EPHA10Q5JZY3 1008 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 SHC4Q6S5L8 630 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 C10orf67Q8IYJ2 551 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 CNNM3Q8NE01 707 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 NCOA7Q8NI08 942 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 FAM71BQ8TC56 605 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 DHX58Q96C10 678 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 CCDC51Q96ER9 411 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 FAM107BQ9H098 131 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 VIPAS39Q9H9C1 493 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 ATP13A2Q9NQ11 1180 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 SLIT3O75094 1523 aa6.46□□□□□ -1.38
PHC3-217ENST00000497658 LTN1O94822 1766 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 NFAT5O94916 1531 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 KLF18A0A0U1RQI7 1052 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 GOLGA8BA8MQT2 603 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 AKR1B15C9JRZ8 316 aaPredicted RBP6.45□□□□□ -1.38
PHC3-217ENST00000497658 GOLIM4O00461 696 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 IL15P40933 162 aaPredicted RBP6.45□□□□□ -1.38
PHC3-217ENST00000497658 IRX3P78415 501 aaPredicted RBP6.45□□□□□ -1.38
PHC3-217ENST00000497658 MDM2Q00987 491 aaPredicted RBP6.45□□□□□ -1.38
PHC3-217ENST00000497658 NR1I3Q14994 352 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 PTPAQ15257 358 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 WHAMMP3Q1A5X7 153 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 TOGARAM2Q6ZUX3 1019 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 RALYLQ86SE5 291 aaKnown RBP6.45□□□□□ -1.38
PHC3-217ENST00000497658 FAM177A1Q8N128 213 aaPredicted RBP6.45□□□□□ -1.38
PHC3-217ENST00000497658 PDILTQ8N807 584 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 CTCFLQ8NI51 663 aaPredicted RBP6.45□□□□□ -1.38
PHC3-217ENST00000497658 PPM1EQ8WY54 764 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 TRERF1Q96PN7 1200 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 SLC26A8Q96RN1 970 aa6.45□□□□□ -1.38
PHC3-217ENST00000497658 CTAGE1Q96RT6 745 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms