RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 TTC6Q86TZ1 520 aa17.7■□□□□ 0.42
COL15A1-204ENST00000496686 CCDC144CPQ8IYA2 1237 aa17.7■□□□□ 0.42
COL15A1-204ENST00000496686 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
COL15A1-204ENST00000496686 CRACR2BQ8N4Y2 399 aaPredicted RBP17.7■□□□□ 0.42
COL15A1-204ENST00000496686 LEO1Q8WVC0 666 aaPredicted RBP17.7■□□□□ 0.42
COL15A1-204ENST00000496686 SPATA32Q96LK8 384 aa17.7■□□□□ 0.42
COL15A1-204ENST00000496686 SLC26A6Q9BXS9 759 aa17.7■□□□□ 0.42
COL15A1-204ENST00000496686 RNF26Q9BY78 433 aaPredicted RBP17.7■□□□□ 0.42
COL15A1-204ENST00000496686 MTFR1LQ9H019 292 aa17.7■□□□□ 0.42
COL15A1-204ENST00000496686 ZNF646O15015 1829 aaPredicted RBP17.7■□□□□ 0.42
COL15A1-204ENST00000496686 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
COL15A1-204ENST00000496686 PPIP5K2O43314 1243 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 C21orf2O43822 256 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 NPM3O75607 178 aaKnown RBP17.69■□□□□ 0.42
COL15A1-204ENST00000496686 KCNA3P22001 575 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 CRKP46108 304 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 PLCD1P51178 756 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 TFAP4Q01664 338 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 EVX2Q03828 476 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 AOC3Q16853 763 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 FAM47AQ5JRC9 791 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 PHKBQ93100 1093 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 DYNLL2Q96FJ2 89 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
COL15A1-204ENST00000496686 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
COL15A1-204ENST00000496686 SAP30BPQ9UHR5 308 aaKnown RBP17.69■□□□□ 0.42
COL15A1-204ENST00000496686 F8W031 263 aaPredicted RBP17.68■□□□□ 0.42
COL15A1-204ENST00000496686 WDHD1O75717 1129 aaPredicted RBP17.68■□□□□ 0.42
COL15A1-204ENST00000496686 LETM1O95202 739 aaPredicted RBP17.68■□□□□ 0.42
COL15A1-204ENST00000496686 RASA1P20936 1047 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 CDK8P49336 464 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 FOSBP53539 338 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 GUCY1B3Q02153 619 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 KIF23Q02241 960 aaPredicted RBP17.68■□□□□ 0.42
COL15A1-204ENST00000496686 KRT40Q6A162 431 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 RCSD1Q6JBY9 416 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 APOBEC3HQ6NTF7 200 aaKnown RBP17.68■□□□□ 0.42
COL15A1-204ENST00000496686 FAM173BQ6P4H8 233 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 USP40Q9NVE5 1235 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 SERPINA10Q9UK55 444 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 RCOR1Q9UKL0 485 aa17.68■□□□□ 0.42
COL15A1-204ENST00000496686 PLIN4Q96Q06 1357 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 TSPY3P0CV98 308 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 TSPY8P0CW00 308 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 KIF5BP33176 963 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 MRE11P49959 708 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 CCDC183Q5T5S1 534 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 CDC42EP5Q6NZY7 148 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 ILDR1Q86SU0 546 aaPredicted RBP17.67■□□□□ 0.42
COL15A1-204ENST00000496686 NEDD1Q8NHV4 660 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 CTCFLQ8NI51 663 aaPredicted RBP17.67■□□□□ 0.42
COL15A1-204ENST00000496686 MXD3Q9BW11 206 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 KAT14Q9H8E8 782 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
COL15A1-204ENST00000496686 SWAP70Q9UH65 585 aa17.67■□□□□ 0.42
COL15A1-204ENST00000496686 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
COL15A1-204ENST00000496686 PPFIA3O75145 1194 aa17.66■□□□□ 0.42
COL15A1-204ENST00000496686 SCNN1DP51172 638 aa17.66■□□□□ 0.42
COL15A1-204ENST00000496686 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
COL15A1-204ENST00000496686 GABPAQ06546 454 aa17.66■□□□□ 0.42
COL15A1-204ENST00000496686 FUT2Q10981 343 aa17.66■□□□□ 0.42
COL15A1-204ENST00000496686 OSBPL5Q9H0X9 879 aaPredicted RBP17.66■□□□□ 0.42
COL15A1-204ENST00000496686 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
COL15A1-204ENST00000496686 TFIP11Q9UBB9 837 aaKnown RBP17.66■□□□□ 0.42
COL15A1-204ENST00000496686 MYH15Q9Y2K3 1946 aa17.66■□□□□ 0.42
COL15A1-204ENST00000496686 YEATS4O95619 227 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 XBP1P17861 261 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 NOVP48745 357 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 GNAQP50148 359 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 SAFBQ15424 915 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL15A1-204ENST00000496686 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 OTUD7BQ6GQQ9 843 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 IDI2Q9BXS1 227 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 EHD4Q9H223 541 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 IL17RBQ9NRM6 502 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 POLR3EQ9NVU0 708 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
COL15A1-204ENST00000496686 TCHHQ07283 1943 aa17.64■□□□□ 0.42
COL15A1-204ENST00000496686 PSME4Q14997 1843 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 ECM29Q5VYK3 1845 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 GOLGA6L4A6NEF3 574 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 NMT2O60551 498 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 HLA-DOAP06340 250 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 U2AF2P26368 475 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL15A1-204ENST00000496686 LRSAM1Q6UWE0 723 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 SLC44A5Q8NCS7 719 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 AIFM3Q96NN9 605 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 USP28Q96RU2 1077 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 DHX36Q9H2U1 1008 aaKnown RBP17.64■□□□□ 0.41
COL15A1-204ENST00000496686 KCNQ5Q9NR82 932 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 MYH1P12882 1939 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 SCN9AQ15858 1988 aa17.64■□□□□ 0.41
COL15A1-204ENST00000496686 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
COL15A1-204ENST00000496686 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 MMP1P03956 469 aa17.63■□□□□ 0.41
COL15A1-204ENST00000496686 NASPP49321 788 aaPredicted RBP17.63■□□□□ 0.41
COL15A1-204ENST00000496686 PICALMQ13492 652 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms