RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 LSRQ86X29 649 aaPredicted RBP4.39□□□□□ -1.71
NCK1-212ENST00000496489 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.39□□□□□ -1.71
NCK1-212ENST00000496489 ZNF507Q8TCN5 953 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 MYRFLQ96LU7 910 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 CRBNQ96SW2 442 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 DPH2Q9BQC3 489 aaPredicted RBP4.39□□□□□ -1.71
NCK1-212ENST00000496489 KCNF1Q9H3M0 494 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 GSX1Q9H4S2 264 aaPredicted RBP4.39□□□□□ -1.71
NCK1-212ENST00000496489 EHMT1Q9H9B1 1298 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 ZNF408Q9H9D4 720 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 FBRSQ9HAH7 460 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 GMIPQ9P107 970 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 ADAM30Q9UKF2 790 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 DNAJA2O60884 412 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 NFICP08651 508 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 MAP4P27816 1152 aaKnown RBP4.38□□□□□ -1.71
NCK1-212ENST00000496489 NKG7Q16617 165 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 HID1Q8IV36 788 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 DZIP1LQ8IYY4 767 aaKnown RBP4.38□□□□□ -1.71
NCK1-212ENST00000496489 ARMC10Q8N2F6 343 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 KCT2Q8NC54 265 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 FAM13CQ8NE31 585 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 TMEM40Q8WWA1 233 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 ACSF2Q96CM8 615 aaPredicted RBP4.38□□□□□ -1.71
NCK1-212ENST00000496489 SHDQ96IW2 340 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 TMEM87BQ96K49 555 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 DNAJC2Q99543 621 aaKnown RBP4.38□□□□□ -1.71
NCK1-212ENST00000496489 SEMA6CQ9H3T2 930 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 ANTXR1Q9H6X2 564 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 TJP2Q9UDY2 1190 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 RNF112Q9ULX5 631 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 PRR36Q9H6K5 1346 aa4.38□□□□□ -1.71
NCK1-212ENST00000496489 FAM86C2PA6NEL3 165 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 SMAD7O15105 426 aaKnown RBP4.37□□□□□ -1.71
NCK1-212ENST00000496489 DHX15O43143 795 aaKnown RBP4.37□□□□□ -1.71
NCK1-212ENST00000496489 YARSP54577 528 aaKnown RBP4.37□□□□□ -1.71
NCK1-212ENST00000496489 MAP7Q14244 749 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 LRRFIP1Q32MZ4 808 aaKnown RBP4.37□□□□□ -1.71
NCK1-212ENST00000496489 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 TMEM201Q5SNT2 666 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 PRAMEF13Q5VWM6 474 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 RUFY4Q6ZNE9 571 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 PRR23CQ6ZRP0 262 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 BEND4Q6ZU67 534 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 ARMCX6Q7L4S7 300 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 FAM20CQ8IXL6 584 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 XAGE3Q8WTP9 111 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 UBXN4Q92575 508 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 ACSS3Q9H6R3 686 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 PCOLCE2Q9UKZ9 415 aa4.37□□□□□ -1.71
NCK1-212ENST00000496489 FAM95CA0A1B0GW59 222 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 SLC22A31A6NKX4 558 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 MEIS3P2A8K0S8 358 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 UPK3BL1B0FP48 263 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 CHURC1-FNTBB4DL54 471 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 UPK3BL2E5RIL1 263 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 DYNC1LI2O43237 492 aaPredicted RBP4.36□□□□□ -1.71
NCK1-212ENST00000496489 RAG1P15918 1043 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 ETFBP38117 255 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 GIPRP48546 466 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 CDK5R2Q13319 367 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 PAOXQ6QHF9 649 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 NLRC3Q7RTR2 1065 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 MCATQ8IVS2 390 aaKnown RBP4.36□□□□□ -1.71
NCK1-212ENST00000496489 MRPL41Q8IXM3 137 aaKnown RBP4.36□□□□□ -1.71
NCK1-212ENST00000496489 CKAP2LQ8IYA6 745 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 PHACTR4Q8IZ21 702 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 FAM169BQ8N8A8 192 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 OR6P1Q8NGX9 317 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 PMFBP1Q8TBY8 1022 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 FOXQ1Q9C009 403 aa4.36□□□□□ -1.71
NCK1-212ENST00000496489 R3HCC1Q9Y3T6 440 aaKnown RBP4.36□□□□□ -1.71
NCK1-212ENST00000496489 CST3P01034 146 aaPredicted RBP4.35□□□□□ -1.71
NCK1-212ENST00000496489 POLR2BP30876 1174 aaKnown RBP4.35□□□□□ -1.71
NCK1-212ENST00000496489 SLBPQ14493 270 aaKnown RBP eCLIP4.35□□□□□ -1.71
NCK1-212ENST00000496489 NFKBIBQ15653 356 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 PPP2R5EQ16537 467 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 TNNI3KQ59H18 835 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 SLC6A19Q695T7 634 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 ANKS3Q6ZW76 656 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 RBBP8NLQ8NC74 664 aaPredicted RBP4.35□□□□□ -1.71
NCK1-212ENST00000496489 HNRNPLLQ8WVV9 542 aaKnown RBP4.35□□□□□ -1.71
NCK1-212ENST00000496489 EZH1Q92800 747 aaPredicted RBP4.35□□□□□ -1.71
NCK1-212ENST00000496489 ARMC5Q96C12 935 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 ATG4CQ96DT6 458 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 MIPEPQ99797 713 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 TM9SF2Q99805 663 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 HIRIP3Q9BW71 556 aaPredicted RBP4.35□□□□□ -1.71
NCK1-212ENST00000496489 TRIM55Q9BYV6 548 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 PRKAG3Q9UGI9 489 aa4.35□□□□□ -1.71
NCK1-212ENST00000496489 LRIG2O94898 1065 aa4.34□□□□□ -1.71
NCK1-212ENST00000496489 NME1P15531 152 aaKnown RBP4.34□□□□□ -1.71
NCK1-212ENST00000496489 GUCY2CP25092 1073 aa4.34□□□□□ -1.71
NCK1-212ENST00000496489 CHMP4BP1P59074 171 aa4.34□□□□□ -1.71
NCK1-212ENST00000496489 LARP1BQ659C4 914 aaKnown RBP4.34□□□□□ -1.71
NCK1-212ENST00000496489 SLFN12Q8IYM2 578 aa4.34□□□□□ -1.71
NCK1-212ENST00000496489 TOP6BLQ8N6T0 577 aa4.34□□□□□ -1.71
NCK1-212ENST00000496489 CYB5D2Q8WUJ1 264 aa4.34□□□□□ -1.71
NCK1-212ENST00000496489 KIF2CQ99661 725 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms