RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 FGFR2P21802 821 aa16.44■□□□□ 0.22
TFE3-205ENST00000495940 CCND3P30281 292 aaPredicted RBP16.44■□□□□ 0.22
TFE3-205ENST00000495940 WDR66Q8TBY9 1149 aa16.44■□□□□ 0.22
TFE3-205ENST00000495940 TBC1D2Q9BYX2 928 aa16.44■□□□□ 0.22
TFE3-205ENST00000495940 DDX4Q9NQI0 724 aaKnown RBP16.44■□□□□ 0.22
TFE3-205ENST00000495940 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
TFE3-205ENST00000495940 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
TFE3-205ENST00000495940 CACNB2Q08289 660 aaPredicted RBP16.43■□□□□ 0.22
TFE3-205ENST00000495940 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
TFE3-205ENST00000495940 SLC4A10Q6U841 1118 aa16.43■□□□□ 0.22
TFE3-205ENST00000495940 ANKRD44Q8N8A2 993 aa16.43■□□□□ 0.22
TFE3-205ENST00000495940 LBHD1Q9BQE6 289 aaPredicted RBP16.43■□□□□ 0.22
TFE3-205ENST00000495940 ASCC2Q9H1I8 757 aaPredicted RBP16.43■□□□□ 0.22
TFE3-205ENST00000495940 TTYH1Q9H313 450 aaPredicted RBP16.43■□□□□ 0.22
TFE3-205ENST00000495940 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
TFE3-205ENST00000495940 HMGCS2P54868 508 aa16.42■□□□□ 0.22
TFE3-205ENST00000495940 CCL14Q16627 93 aa16.42■□□□□ 0.22
TFE3-205ENST00000495940 LHX8Q68G74 356 aa16.42■□□□□ 0.22
TFE3-205ENST00000495940 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
TFE3-205ENST00000495940 IDI2Q9BXS1 227 aa16.42■□□□□ 0.22
TFE3-205ENST00000495940 SEMA6BQ9H3T3 888 aa16.42■□□□□ 0.22
TFE3-205ENST00000495940 RLFQ13129 1914 aa16.42■□□□□ 0.22
TFE3-205ENST00000495940 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 ENTPD3O75355 529 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 ALDH1L1O75891 902 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 LDHBP07195 334 aaKnown RBP16.41■□□□□ 0.22
TFE3-205ENST00000495940 FOSL2P15408 326 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
TFE3-205ENST00000495940 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 SPP2Q13103 211 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 PICALMQ13492 652 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 RABL6Q3YEC7 729 aaPredicted RBP16.41■□□□□ 0.22
TFE3-205ENST00000495940 C9orf50Q5SZB4 431 aa16.41■□□□□ 0.22
TFE3-205ENST00000495940 ATN1P54259 1190 aaPredicted RBP16.4■□□□□ 0.22
TFE3-205ENST00000495940 SHHQ15465 462 aa16.4■□□□□ 0.22
TFE3-205ENST00000495940 USP38Q8NB14 1042 aa16.4■□□□□ 0.22
TFE3-205ENST00000495940 SRCIN1Q9C0H9 1055 aa16.4■□□□□ 0.22
TFE3-205ENST00000495940 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
TFE3-205ENST00000495940 DDX11L8A8MPP1 907 aa16.39■□□□□ 0.21
TFE3-205ENST00000495940 SLC5A1P13866 664 aa16.39■□□□□ 0.21
TFE3-205ENST00000495940 SOCS4Q8WXH5 440 aa16.39■□□□□ 0.21
TFE3-205ENST00000495940 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
TFE3-205ENST00000495940 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
TFE3-205ENST00000495940 SENP6Q9GZR1 1112 aaPredicted RBP16.39■□□□□ 0.21
TFE3-205ENST00000495940 DCTPP1Q9H773 170 aa16.39■□□□□ 0.21
TFE3-205ENST00000495940 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
TFE3-205ENST00000495940 GAKO14976 1311 aa16.39■□□□□ 0.21
TFE3-205ENST00000495940 HMMRO75330 724 aa16.38■□□□□ 0.21
TFE3-205ENST00000495940 ZNF280CQ8ND82 737 aa16.38■□□□□ 0.21
TFE3-205ENST00000495940 UTYO14607 1347 aa16.38■□□□□ 0.21
TFE3-205ENST00000495940 TNFRSF10AO00220 468 aa16.37■□□□□ 0.21
TFE3-205ENST00000495940 CDC45O75419 566 aa16.37■□□□□ 0.21
TFE3-205ENST00000495940 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
TFE3-205ENST00000495940 MFAP1P55081 439 aaKnown RBP16.37■□□□□ 0.21
TFE3-205ENST00000495940 RTP1P59025 263 aa16.37■□□□□ 0.21
TFE3-205ENST00000495940 PABPC4Q13310 644 aaKnown RBP eCLIP16.37■□□□□ 0.21
TFE3-205ENST00000495940 RRP1BQ14684 758 aaKnown RBP16.37■□□□□ 0.21
TFE3-205ENST00000495940 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
TFE3-205ENST00000495940 PLA2G5P39877 138 aa16.36■□□□□ 0.21
TFE3-205ENST00000495940 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
TFE3-205ENST00000495940 TJAP1Q5JTD0 557 aa16.36■□□□□ 0.21
TFE3-205ENST00000495940 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
TFE3-205ENST00000495940 LPIN2Q92539 896 aa16.36■□□□□ 0.21
TFE3-205ENST00000495940 USP6NLQ92738 828 aa16.36■□□□□ 0.21
TFE3-205ENST00000495940 PORCNQ9H237 461 aa16.36■□□□□ 0.21
TFE3-205ENST00000495940 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
TFE3-205ENST00000495940 TMEM265A0A087WTH1 108 aa16.35■□□□□ 0.21
TFE3-205ENST00000495940 BTDP43251 543 aa16.35■□□□□ 0.21
TFE3-205ENST00000495940 PHKA1P46020 1223 aa16.35■□□□□ 0.21
TFE3-205ENST00000495940 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
TFE3-205ENST00000495940 APBA2Q99767 749 aa16.35■□□□□ 0.21
TFE3-205ENST00000495940 LNPKQ9C0E8 428 aa16.35■□□□□ 0.21
TFE3-205ENST00000495940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
TFE3-205ENST00000495940 PRKAG2Q9UGJ0 569 aa16.35■□□□□ 0.21
TFE3-205ENST00000495940 ATP11BQ9Y2G3 1177 aa16.35■□□□□ 0.21
TFE3-205ENST00000495940 HERVK_113P62684 666 aa16.34■□□□□ 0.21
TFE3-205ENST00000495940 MTMR2Q13614 643 aa16.34■□□□□ 0.21
TFE3-205ENST00000495940 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
TFE3-205ENST00000495940 MORN1Q5T089 497 aa16.34■□□□□ 0.21
TFE3-205ENST00000495940 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
TFE3-205ENST00000495940 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
TFE3-205ENST00000495940 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
TFE3-205ENST00000495940 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
TFE3-205ENST00000495940 PRDM5Q9NQX1 630 aaPredicted RBP16.34■□□□□ 0.21
TFE3-205ENST00000495940 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.21
TFE3-205ENST00000495940 EYA2O00167 538 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 MCM4P33991 863 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 RGS2P41220 211 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 SMAD3P84022 425 aaKnown RBP16.33■□□□□ 0.2
TFE3-205ENST00000495940 TRMT44Q8IYL2 757 aaKnown RBP16.33■□□□□ 0.2
TFE3-205ENST00000495940 GPRC5AQ8NFJ5 357 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 BADQ92934 168 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 PAGR1Q9BTK6 254 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 FLRT1Q9NZU1 646 aa16.33■□□□□ 0.2
TFE3-205ENST00000495940 MROH7-TTC4A0A0A0MT08 1334 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 USP17L5A8MUK1 530 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 TBC1D12O60347 775 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 MAPK4P31152 587 aa16.32■□□□□ 0.2
TFE3-205ENST00000495940 CAP2P40123 477 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms