RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 GTF2A2P52657 109 aa23.92■■□□□ 1.42
LMO4-204ENST00000495705 EVX2Q03828 476 aa23.92■■□□□ 1.42
LMO4-204ENST00000495705 ALX1Q15699 326 aa23.92■■□□□ 1.42
LMO4-204ENST00000495705 CERKLQ49MI3 558 aaPredicted RBP23.92■■□□□ 1.42
LMO4-204ENST00000495705 VPS53Q5VIR6 699 aa23.92■■□□□ 1.42
LMO4-204ENST00000495705 C16orf86Q6ZW13 317 aa23.92■■□□□ 1.42
LMO4-204ENST00000495705 MINDY4BA8MYZ0 360 aa23.91■■□□□ 1.42
LMO4-204ENST00000495705 IRF6O14896 467 aa23.91■■□□□ 1.42
LMO4-204ENST00000495705 GDF11O95390 407 aa23.91■■□□□ 1.42
LMO4-204ENST00000495705 DYNLL2Q96FJ2 89 aa23.91■■□□□ 1.42
LMO4-204ENST00000495705 BEGAINQ9BUH8 593 aa23.91■■□□□ 1.42
LMO4-204ENST00000495705 WBP1LQ9NX94 342 aa23.91■■□□□ 1.42
LMO4-204ENST00000495705 ZBTB21Q9ULJ3 1066 aa23.91■■□□□ 1.42
LMO4-204ENST00000495705 TM4SF4P48230 202 aa23.9■■□□□ 1.42
LMO4-204ENST00000495705 SNAPC2Q13487 334 aa23.9■■□□□ 1.42
LMO4-204ENST00000495705 SLC44A5Q8NCS7 719 aa23.9■■□□□ 1.42
LMO4-204ENST00000495705 KCNH4Q9UQ05 1017 aa23.9■■□□□ 1.42
LMO4-204ENST00000495705 ZHX2Q9Y6X8 837 aa23.9■■□□□ 1.42
LMO4-204ENST00000495705 PTPRFP10586 1907 aa23.89■■□□□ 1.42
LMO4-204ENST00000495705 USP17L5A8MUK1 530 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 CXCL11O14625 94 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 SLC3A2P08195 630 aaKnown RBP23.89■■□□□ 1.41
LMO4-204ENST00000495705 CDK8P49336 464 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 ABCB5Q2M3G0 1257 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 AS3MTQ9HBK9 375 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 ZNF287Q9HBT7 754 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 CABP5Q9NP86 173 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 PCNTO95613 3336 aa23.89■■□□□ 1.41
LMO4-204ENST00000495705 TESPA1A2RU30 521 aaPredicted RBP23.88■■□□□ 1.41
LMO4-204ENST00000495705 CETPP11597 493 aa23.88■■□□□ 1.41
LMO4-204ENST00000495705 PPARAQ07869 468 aa23.88■■□□□ 1.41
LMO4-204ENST00000495705 MS4A4AQ96JQ5 239 aa23.88■■□□□ 1.41
LMO4-204ENST00000495705 CCDC17Q96LX7 622 aa23.88■■□□□ 1.41
LMO4-204ENST00000495705 DSCC1Q9BVC3 393 aa23.88■■□□□ 1.41
LMO4-204ENST00000495705 AFG3L2Q9Y4W6 797 aa23.88■■□□□ 1.41
LMO4-204ENST00000495705 CCL15-CCL14A0A0B4J2E2 113 aa23.87■■□□□ 1.41
LMO4-204ENST00000495705 SMIM22K7EJ46 135 aa23.87■■□□□ 1.41
LMO4-204ENST00000495705 CA12O43570 354 aa23.87■■□□□ 1.41
LMO4-204ENST00000495705 GH2P01242 217 aa23.87■■□□□ 1.41
LMO4-204ENST00000495705 FGAP02671 866 aa23.87■■□□□ 1.41
LMO4-204ENST00000495705 CCL15Q16663 113 aa23.87■■□□□ 1.41
LMO4-204ENST00000495705 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.87■■□□□ 1.41
LMO4-204ENST00000495705 HSPA1AP0DMV8 641 aaKnown RBP23.86■■□□□ 1.41
LMO4-204ENST00000495705 HSPA1BP0DMV9 641 aaKnown RBP23.86■■□□□ 1.41
LMO4-204ENST00000495705 JAG1P78504 1218 aa23.86■■□□□ 1.41
LMO4-204ENST00000495705 ZNF280CQ8ND82 737 aa23.86■■□□□ 1.41
LMO4-204ENST00000495705 IL25Q9H293 177 aa23.86■■□□□ 1.41
LMO4-204ENST00000495705 ANAPC4Q9UJX5 808 aa23.86■■□□□ 1.41
LMO4-204ENST00000495705 LAMA4Q16363 1823 aa23.86■■□□□ 1.41
LMO4-204ENST00000495705 SGSM2O43147 1006 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 ALDH1A1P00352 501 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 PDE4BQ07343 736 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 OTUD7BQ6GQQ9 843 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 CASC1Q6TDU7 716 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 TMEM179Q6ZVK1 233 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 CCDC84Q86UT8 332 aaPredicted RBP23.85■■□□□ 1.41
LMO4-204ENST00000495705 BRI3BPQ8WY22 251 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 WDR18Q9BV38 432 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 MKNK2Q9HBH9 465 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 SAGE1Q9NXZ1 904 aa23.85■■□□□ 1.41
LMO4-204ENST00000495705 TRIM75PA6NK02 468 aa23.84■■□□□ 1.41
LMO4-204ENST00000495705 MPHOSPH10O00566 681 aaKnown RBP23.84■■□□□ 1.41
LMO4-204ENST00000495705 SHROOM1Q2M3G4 852 aaPredicted RBP23.84■■□□□ 1.41
LMO4-204ENST00000495705 IFNL1Q8IU54 200 aa23.84■■□□□ 1.41
LMO4-204ENST00000495705 A0A0G2JLL6 359 aaPredicted RBP23.83■■□□□ 1.41
LMO4-204ENST00000495705 CDC45O75419 566 aa23.83■■□□□ 1.41
LMO4-204ENST00000495705 RAB3GAP1Q15042 981 aa23.83■■□□□ 1.41
LMO4-204ENST00000495705 PRRT2Q7Z6L0 340 aaPredicted RBP23.83■■□□□ 1.41
LMO4-204ENST00000495705 CTNNA3Q9UI47 895 aa23.83■■□□□ 1.41
LMO4-204ENST00000495705 LOC285556D6RIA3 1793 aa23.83■■□□□ 1.4
LMO4-204ENST00000495705 GREB1LQ9C091 1923 aaPredicted RBP23.82■■□□□ 1.4
LMO4-204ENST00000495705 IGF2BP3O00425 579 aaKnown RBP eCLIP23.82■■□□□ 1.4
LMO4-204ENST00000495705 AKR1B1P15121 316 aa23.82■■□□□ 1.4
LMO4-204ENST00000495705 SPP2Q13103 211 aa23.82■■□□□ 1.4
LMO4-204ENST00000495705 FASTKD5Q7L8L6 764 aaKnown RBP23.82■■□□□ 1.4
LMO4-204ENST00000495705 STK11IPQ8N1F8 1099 aa23.82■■□□□ 1.4
LMO4-204ENST00000495705 ZCCHC17Q9NP64 241 aaKnown RBP23.82■■□□□ 1.4
LMO4-204ENST00000495705 RNF186Q9NXI6 227 aa23.82■■□□□ 1.4
LMO4-204ENST00000495705 RASA1P20936 1047 aa23.81■■□□□ 1.4
LMO4-204ENST00000495705 CTDSPL2Q05D32 466 aa23.81■■□□□ 1.4
LMO4-204ENST00000495705 ZNF444Q8N0Y2 327 aaPredicted RBP23.81■■□□□ 1.4
LMO4-204ENST00000495705 PTPN18Q99952 460 aa23.81■■□□□ 1.4
LMO4-204ENST00000495705 ESYT1Q9BSJ8 1104 aa23.81■■□□□ 1.4
LMO4-204ENST00000495705 USP17L10C9JJH3 530 aa23.8■■□□□ 1.4
LMO4-204ENST00000495705 GUCY1A2P33402 732 aa23.8■■□□□ 1.4
LMO4-204ENST00000495705 BACE1P56817 501 aa23.8■■□□□ 1.4
LMO4-204ENST00000495705 SEPT2Q15019 361 aa23.8■■□□□ 1.4
LMO4-204ENST00000495705 ANKRD23Q86SG2 305 aa23.8■■□□□ 1.4
LMO4-204ENST00000495705 PROCA1Q8NCQ7 364 aaPredicted RBP23.8■■□□□ 1.4
LMO4-204ENST00000495705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.8■■□□□ 1.4
LMO4-204ENST00000495705 C19orf81C9J6K1 198 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 ZNF213O14771 459 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 PRDM1O75626 825 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 TRPA1O75762 1119 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 PCP11498 1178 aaKnown RBP23.79■■□□□ 1.4
LMO4-204ENST00000495705 MTMR2Q13614 643 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 MOGSQ13724 837 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 SH3D19Q5HYK7 790 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 KIAA1211Q6ZU35 1233 aa23.79■■□□□ 1.4
LMO4-204ENST00000495705 CFHR5Q9BXR6 569 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms