RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 VPS33BQ9H267 617 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
RAB11FIP3-211ENST00000495663 SASH1O94885 1247 aa12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 TFCP2Q12800 502 aa12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 PUM3Q15397 648 aaKnown RBP12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 WASHC4Q2M389 1173 aa12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 KIF1BPQ96EK5 621 aa12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 AKAP2Q9Y2D5 859 aa12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
RAB11FIP3-211ENST00000495663 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 MYH13Q9UKX3 1938 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 APBB1O00213 710 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 MEN1O00255 615 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 PPIP5K2O43314 1243 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 IFIT1P09914 478 aaKnown RBP12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 RHOQP17081 205 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 LMNB1P20700 586 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 LYSMD3Q7Z3D4 306 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 MTMR14Q8NCE2 650 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 ZNF277Q9NRM2 450 aaPredicted RBP12.43□□□□□ -0.42
RAB11FIP3-211ENST00000495663 WTIPA6NIX2 430 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 SNAP23O00161 211 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 SLC5A1P13866 664 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 FGFR2P21802 821 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 KIAA2012Q0VF49 1180 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 AOC3Q16853 763 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 SV2AQ7L0J3 742 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 LARGE2Q8N3Y3 721 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 LPIN2Q92539 896 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 GPR101Q96P66 508 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 GPR108Q9NPR9 543 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 ZNF609O15014 1411 aa12.42□□□□□ -0.42
RAB11FIP3-211ENST00000495663 A0A1B0GUL7 405 aa12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 GPR37L1O60883 481 aa12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 IGHDP01880 384 aa12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 NR1H3Q13133 447 aa12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 CLASRPQ8N2M8 674 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 PSME4Q14997 1843 aa12.41□□□□□ -0.42
RAB11FIP3-211ENST00000495663 KLRK1P26718 216 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 PRELPP51888 382 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 TIMM10P62072 90 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 CAVIN4Q5BKX8 364 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 ZNF804AQ7Z570 1209 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 CUEDC1Q9NWM3 386 aaPredicted RBP12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
RAB11FIP3-211ENST00000495663 IRS2Q9Y4H2 1338 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 COL4A5P29400 1685 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 SCTRP47872 440 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 C9orf131Q5VYM1 1079 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 TXNRD3Q86VQ6 643 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 VPS37DQ86XT2 251 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 CCDC136Q96JN2 1154 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
RAB11FIP3-211ENST00000495663 ECE2O60344 883 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 HIBADHP31937 336 aaKnown RBP12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 GYG1P46976 350 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 ANKRD45Q5TZF3 282 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 PODNQ7Z5L7 613 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 AACSQ86V21 672 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 XAGE2Q96GT9 111 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 DBNDD1Q9H9R9 158 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 PCDHB11Q9Y5F2 797 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
RAB11FIP3-211ENST00000495663 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 ADORA1P30542 326 aa12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 RNF144AP50876 292 aaPredicted RBP12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 CCDC8Q9H0W5 538 aaPredicted RBP12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 CD209Q9NNX6 404 aa12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 PPP4R2Q9NY27 417 aa12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
RAB11FIP3-211ENST00000495663 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms