RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 PROCA1Q8NCQ7 364 aaPredicted RBP21.7■■□□□ 1.06
COL20A1-207ENST00000494913 WDR18Q9BV38 432 aa21.7■■□□□ 1.06
COL20A1-207ENST00000494913 GINM1Q9NU53 330 aa21.7■■□□□ 1.06
COL20A1-207ENST00000494913 ZBTB21Q9ULJ3 1066 aa21.7■■□□□ 1.06
COL20A1-207ENST00000494913 AGTPBP1Q9UPW5 1226 aa21.7■■□□□ 1.06
COL20A1-207ENST00000494913 PTPRFP10586 1907 aa21.69■■□□□ 1.06
COL20A1-207ENST00000494913 KBTBD3Q8NAB2 608 aa21.69■■□□□ 1.06
COL20A1-207ENST00000494913 TTC41PQ6P2S7 1318 aa21.68■■□□□ 1.06
COL20A1-207ENST00000494913 ERC2O15083 957 aa21.68■■□□□ 1.06
COL20A1-207ENST00000494913 GH2P01242 217 aa21.68■■□□□ 1.06
COL20A1-207ENST00000494913 SOX10P56693 466 aa21.68■■□□□ 1.06
COL20A1-207ENST00000494913 MTMR2Q13614 643 aa21.68■■□□□ 1.06
COL20A1-207ENST00000494913 CERKLQ49MI3 558 aaPredicted RBP21.68■■□□□ 1.06
COL20A1-207ENST00000494913 GCC1Q96CN9 775 aa21.68■■□□□ 1.06
COL20A1-207ENST00000494913 PUS7LQ9H0K6 701 aaKnown RBP21.68■■□□□ 1.06
COL20A1-207ENST00000494913 ATP8A2Q9NTI2 1148 aa21.68■■□□□ 1.06
COL20A1-207ENST00000494913 BACE1P56817 501 aa21.67■■□□□ 1.06
COL20A1-207ENST00000494913 EVX2Q03828 476 aa21.67■■□□□ 1.06
COL20A1-207ENST00000494913 SH3D19Q5HYK7 790 aa21.67■■□□□ 1.06
COL20A1-207ENST00000494913 SMCR8Q8TEV9 937 aaPredicted RBP21.67■■□□□ 1.06
COL20A1-207ENST00000494913 SUPT16HQ9Y5B9 1047 aaKnown RBP21.67■■□□□ 1.06
COL20A1-207ENST00000494913 CYP2D6P10635 497 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 BCRP11274 1271 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 MX1P20591 662 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 SHMT1P34896 483 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 PSMC4P43686 418 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 RGS19P49795 217 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 EXOC6Q8TAG9 804 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 PI4K2BQ8TCG2 481 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 MYH7P12883 1935 aa21.66■■□□□ 1.06
COL20A1-207ENST00000494913 USP17L10C9JJH3 530 aa21.65■■□□□ 1.06
COL20A1-207ENST00000494913 RNF113AO15541 343 aaKnown RBP21.65■■□□□ 1.06
COL20A1-207ENST00000494913 GLRX3O76003 335 aaKnown RBP21.65■■□□□ 1.06
COL20A1-207ENST00000494913 GABPAQ06546 454 aa21.65■■□□□ 1.06
COL20A1-207ENST00000494913 ABCB5Q2M3G0 1257 aa21.65■■□□□ 1.06
COL20A1-207ENST00000494913 TMOD4Q9NZQ9 345 aa21.65■■□□□ 1.06
COL20A1-207ENST00000494913 SLC4A4Q9Y6R1 1079 aa21.65■■□□□ 1.06
COL20A1-207ENST00000494913 CENPFP49454 3210 aa21.65■■□□□ 1.06
COL20A1-207ENST00000494913 NAV1Q8NEY1 1877 aa21.65■■□□□ 1.06
COL20A1-207ENST00000494913 C19orf81C9J6K1 198 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 CTGFP29279 349 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 RAB3GAP1Q15042 981 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 DDRGK1Q96HY6 314 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 TRIM47Q96LD4 638 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 RWDD1Q9H446 243 aaPredicted RBP21.64■■□□□ 1.06
COL20A1-207ENST00000494913 CABP5Q9NP86 173 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 PNMA3Q9UL41 463 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 PTCH2Q9Y6C5 1203 aa21.64■■□□□ 1.06
COL20A1-207ENST00000494913 FMNL1O95466 1100 aaPredicted RBP21.64■■□□□ 1.05
COL20A1-207ENST00000494913 GNRH1P01148 92 aa21.64■■□□□ 1.05
COL20A1-207ENST00000494913 PABPC4Q13310 644 aaKnown RBP eCLIP21.64■■□□□ 1.05
COL20A1-207ENST00000494913 DDX60LQ5H9U9 1706 aaKnown RBP21.63■■□□□ 1.05
COL20A1-207ENST00000494913 USP17L12C9JPN9 530 aa21.63■■□□□ 1.05
COL20A1-207ENST00000494913 USP17L21D6R901 530 aa21.63■■□□□ 1.05
COL20A1-207ENST00000494913 ZFYP08048 801 aaPredicted RBP21.63■■□□□ 1.05
COL20A1-207ENST00000494913 OSBPP22059 807 aa21.63■■□□□ 1.05
COL20A1-207ENST00000494913 APPBP2Q92624 585 aa21.63■■□□□ 1.05
COL20A1-207ENST00000494913 OSBP2Q969R2 916 aa21.63■■□□□ 1.05
COL20A1-207ENST00000494913 DYNLL2Q96FJ2 89 aa21.63■■□□□ 1.05
COL20A1-207ENST00000494913 STRBPQ96SI9 672 aaKnown RBP21.63■■□□□ 1.05
COL20A1-207ENST00000494913 ASCC2Q9H1I8 757 aaPredicted RBP21.63■■□□□ 1.05
COL20A1-207ENST00000494913 ZSWIM8A7E2V4 1837 aa21.63■■□□□ 1.05
COL20A1-207ENST00000494913 CYP2D7A0A087X1C5 515 aa21.62■■□□□ 1.05
COL20A1-207ENST00000494913 MLLT1Q03111 559 aaPredicted RBP21.62■■□□□ 1.05
COL20A1-207ENST00000494913 AMOTL1Q8IY63 956 aa21.62■■□□□ 1.05
COL20A1-207ENST00000494913 ANKRD13CQ8N6S4 541 aa21.62■■□□□ 1.05
COL20A1-207ENST00000494913 SLC44A5Q8NCS7 719 aa21.62■■□□□ 1.05
COL20A1-207ENST00000494913 SALL3Q9BXA9 1300 aa21.62■■□□□ 1.05
COL20A1-207ENST00000494913 MPHOSPH10O00566 681 aaKnown RBP21.61■■□□□ 1.05
COL20A1-207ENST00000494913 HOXD10P28358 340 aa21.61■■□□□ 1.05
COL20A1-207ENST00000494913 LRRFIP1Q32MZ4 808 aaKnown RBP21.61■■□□□ 1.05
COL20A1-207ENST00000494913 C12orf60Q5U649 245 aa21.61■■□□□ 1.05
COL20A1-207ENST00000494913 EMILIN3Q9NT22 766 aa21.61■■□□□ 1.05
COL20A1-207ENST00000494913 LOC285556D6RIA3 1793 aa21.61■■□□□ 1.05
COL20A1-207ENST00000494913 SMIM22K7EJ46 135 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 FCGRTP55899 365 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 SEPT2Q15019 361 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 SLC9C1Q4G0N8 1177 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 USP17L2Q6R6M4 530 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 FEZ1Q99689 392 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 FSD1Q9BTV5 496 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 SRRDQ9UH36 339 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 SWAP70Q9UH65 585 aa21.6■■□□□ 1.05
COL20A1-207ENST00000494913 BAZ2AQ9UIF9 1905 aaKnown RBP21.6■■□□□ 1.05
COL20A1-207ENST00000494913 IGHDP01880 384 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 HOXA7P31268 230 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-207ENST00000494913 GUCY1A2P33402 732 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 GCLCP48506 637 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-207ENST00000494913 PRMT2P55345 433 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 IRX3P78415 501 aaPredicted RBP21.59■■□□□ 1.05
COL20A1-207ENST00000494913 ZYXQ15942 572 aaKnown RBP21.59■■□□□ 1.05
COL20A1-207ENST00000494913 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 CTR9Q6PD62 1173 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 ACER1Q8TDN7 264 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 ARMC5Q96C12 935 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 STAP2Q9UGK3 403 aa21.59■■□□□ 1.05
COL20A1-207ENST00000494913 M0R2C6 588 aa21.58■■□□□ 1.05
COL20A1-207ENST00000494913 PDE1AP54750 535 aa21.58■■□□□ 1.05
COL20A1-207ENST00000494913 NBPF11Q86T75 865 aa21.58■■□□□ 1.05
COL20A1-207ENST00000494913 SMC5Q8IY18 1101 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms