RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 MBD4O95243 580 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
SCRN1-209ENST00000494620 USP14P54578 494 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
SCRN1-209ENST00000494620 RAB3GAP1Q15042 981 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 SH3D19Q5HYK7 790 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 CCDC84Q86UT8 332 aaPredicted RBP13.25□□□□□ -0.29
SCRN1-209ENST00000494620 RAET1EQ8TD07 263 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 FEZ1Q99689 392 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 RWDD1Q9H446 243 aaPredicted RBP13.25□□□□□ -0.29
SCRN1-209ENST00000494620 ARMT1Q9H993 441 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
SCRN1-209ENST00000494620 TCRBV5S4A2TA0A5A2 114 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
SCRN1-209ENST00000494620 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
SCRN1-209ENST00000494620 GH2P01242 217 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 MTMR2Q13614 643 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
SCRN1-209ENST00000494620 TATDN1Q6P1N9 297 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 USP17L2Q6R6M4 530 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
SCRN1-209ENST00000494620 LCORLQ8N3X6 602 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 KBTBD3Q8NAB2 608 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 SDR42E1Q8WUS8 393 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 COA7Q96BR5 231 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 DCP1AQ9NPI6 582 aaPredicted RBP13.24□□□□□ -0.29
SCRN1-209ENST00000494620 SLC4A4Q9Y6R1 1079 aa13.24□□□□□ -0.29
SCRN1-209ENST00000494620 BCRP11274 1271 aa13.23□□□□□ -0.29
SCRN1-209ENST00000494620 PLCD1P51178 756 aa13.23□□□□□ -0.29
SCRN1-209ENST00000494620 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
SCRN1-209ENST00000494620 GTF3C2Q8WUA4 911 aaPredicted RBP13.23□□□□□ -0.29
SCRN1-209ENST00000494620 DNAJC18Q9H819 358 aa13.23□□□□□ -0.29
SCRN1-209ENST00000494620 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.23□□□□□ -0.29
SCRN1-209ENST00000494620 BIN2Q9UBW5 565 aaPredicted RBP13.23□□□□□ -0.29
SCRN1-209ENST00000494620 SRRDQ9UH36 339 aa13.23□□□□□ -0.29
SCRN1-209ENST00000494620 OTOFQ9HC10 1997 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 TNPO2O14787 897 aaKnown RBP13.22□□□□□ -0.29
SCRN1-209ENST00000494620 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
SCRN1-209ENST00000494620 GNAT2P19087 354 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 HOXA7P31268 230 aaPredicted RBP13.22□□□□□ -0.29
SCRN1-209ENST00000494620 UBXN2AP68543 259 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 TREML2Q5T2D2 321 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 ANKRD13CQ8N6S4 541 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 APPBP2Q92624 585 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 CCDC17Q96LX7 622 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 ARHGAP39Q9C0H5 1083 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 PTCH2Q9Y6C5 1203 aa13.22□□□□□ -0.29
SCRN1-209ENST00000494620 MYPNQ86TC9 1320 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 USP17L12C9JPN9 530 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 USP17L21D6R901 530 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 APPP05067 770 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 MX1P20591 662 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 FAM110CQ1W6H9 321 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 ASCC2Q9H1I8 757 aaPredicted RBP13.21□□□□□ -0.29
SCRN1-209ENST00000494620 ZNF287Q9HBT7 754 aa13.21□□□□□ -0.29
SCRN1-209ENST00000494620 ADGRA2Q96PE1 1338 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 TNRC18O15417 2968 aaPredicted RBP13.2□□□□□ -0.3
SCRN1-209ENST00000494620 PRKAB2O43741 272 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 GRK4P32298 578 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 SHMT1P34896 483 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 GABPAQ06546 454 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 TMEM179Q6ZVK1 233 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
SCRN1-209ENST00000494620 SH2D4AQ9H788 454 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
SCRN1-209ENST00000494620 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
SCRN1-209ENST00000494620 DOCK2Q92608 1830 aa13.2□□□□□ -0.3
SCRN1-209ENST00000494620 JAG1P78504 1218 aa13.19□□□□□ -0.3
SCRN1-209ENST00000494620 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
SCRN1-209ENST00000494620 GPRC5AQ8NFJ5 357 aa13.19□□□□□ -0.3
SCRN1-209ENST00000494620 STRBPQ96SI9 672 aaKnown RBP13.19□□□□□ -0.3
SCRN1-209ENST00000494620 P2RX7Q99572 595 aaKnown RBP13.19□□□□□ -0.3
SCRN1-209ENST00000494620 KIAA1683Q9H0B3 1180 aa13.19□□□□□ -0.3
SCRN1-209ENST00000494620 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
SCRN1-209ENST00000494620 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
SCRN1-209ENST00000494620 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
SCRN1-209ENST00000494620 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
SCRN1-209ENST00000494620 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
SCRN1-209ENST00000494620 CDK8P49336 464 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 HERVK_113P62684 666 aa13.18□□□□□ -0.3
SCRN1-209ENST00000494620 CCNA1P78396 465 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms