RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	CCDC129	Q6ZRS4	1044 aa		11.93	□□□□□ -0.5
MACF1-222	ENST00000494012	CNKSR2	Q8WXI2	1034 aa		11.93	□□□□□ -0.5
MACF1-222	ENST00000494012	AS3MT	Q9HBK9	375 aa		11.93	□□□□□ -0.5
MACF1-222	ENST00000494012	ZNF287	Q9HBT7	754 aa		11.93	□□□□□ -0.5
MACF1-222	ENST00000494012	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.93	□□□□□ -0.5
MACF1-222	ENST00000494012	WBP1L	Q9NX94	342 aa		11.93	□□□□□ -0.5
MACF1-222	ENST00000494012	LOC285556	D6RIA3	1793 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	ZMYM6	O95789	1325 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	MINDY4B	A8MYZ0	360 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	IRF6	O14896	467 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	SLC3A2	P08195	630 aa	Known RBP	11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	CETP	P11597	493 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	SHMT1	P34896	483 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	GJA5	P36382	358 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	TM4SF4	P48230	202 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	CERKL	Q49MI3	558 aa	Predicted RBP	11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	OTUD7B	Q6GQQ9	843 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	C16orf86	Q6ZW13	317 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	ZIC5	Q96T25	663 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	SAGE1	Q9NXZ1	904 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	ZBTB21	Q9ULJ3	1066 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	ZHX2	Q9Y6X8	837 aa		11.92	□□□□□ -0.5
MACF1-222	ENST00000494012	CYP2D7	A0A087X1C5	515 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	CCL15-CCL14	A0A0B4J2E2	113 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	USP17L5	A8MUK1	530 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	CXCL11	O14625	94 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	GDF11	O95390	407 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	ALDH1A1	P00352	501 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	CCL15	Q16663	113 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	ABCB5	Q2M3G0	1257 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	CABP5	Q9NP86	173 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	KCNH4	Q9UQ05	1017 aa		11.91	□□□□□ -0.5
MACF1-222	ENST00000494012	GREB1L	Q9C091	1923 aa	Predicted RBP	11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	TESPA1	A2RU30	521 aa	Predicted RBP	11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	GH2	P01242	217 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	HSPD1	P10809	573 aa	Known RBP	11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	CHML	P26374	656 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	CDK8	P49336	464 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	EVX2	Q03828	476 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	RRP1B	Q14684	758 aa	Known RBP	11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	ALX1	Q15699	326 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	VPS53	Q5VIR6	699 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	CASC1	Q6TDU7	716 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	SKAP1	Q86WV1	359 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	IFNL1	Q8IU54	200 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	ZNF280C	Q8ND82	737 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	DYNLL2	Q96FJ2	89 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	MS4A4A	Q96JQ5	239 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	CCDC17	Q96LX7	622 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	MKNK2	Q9HBH9	465 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	AFG3L2	Q9Y4W6	797 aa		11.9	□□□□□ -0.5
MACF1-222	ENST00000494012	TRIM75P	A6NK02	468 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	MPHOSPH10	O00566	681 aa	Known RBP	11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	FOXP2	O15409	715 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	PDE4B	Q07343	736 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	PPARA	Q07869	468 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	RAB3GAP1	Q15042	981 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	TMEM179	Q6ZVK1	233 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	FASTKD5	Q7L8L6	764 aa	Known RBP	11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	SLC44A5	Q8NCS7	719 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	WDR18	Q9BV38	432 aa		11.89	□□□□□ -0.51
MACF1-222	ENST00000494012	ZCCHC17	Q9NP64	241 aa	Known RBP	11.89	□□□□□ -0.51
MACF1-222	ENST00000494012		A0A0G2JLL6	359 aa	Predicted RBP	11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	FGA	P02671	866 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	CTCF	P49711	727 aa	Predicted RBP	11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	SPP2	Q13103	211 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	BRI3BP	Q8WY22	251 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	FEZ1	Q99689	392 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	DSCC1	Q9BVC3	393 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	RNF186	Q9NXI6	227 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	CTNNA3	Q9UI47	895 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	ANAPC4	Q9UJX5	808 aa		11.88	□□□□□ -0.51
MACF1-222	ENST00000494012	C19orf81	C9J6K1	198 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	USP17L10	C9JJH3	530 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	SGSM2	O43147	1006 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	TRPA1	O75762	1119 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	PC	P11498	1178 aa	Known RBP	11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	JAG1	P78504	1218 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	ANKRD23	Q86SG2	305 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	CCDC84	Q86UT8	332 aa	Predicted RBP	11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	CFHR5	Q9BXR6	569 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	SH2D4A	Q9H788	454 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	MYH4	Q9Y623	1939 aa		11.87	□□□□□ -0.51
MACF1-222	ENST00000494012	SMIM22	K7EJ46	135 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	FOXN1	O15353	648 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	CDC45	O75419	566 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	AKR1B1	P15121	316 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	RASA1	P20936	1047 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	BACE1	P56817	501 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	MTMR2	Q13614	643 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	SEPT2	Q15019	361 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	GADL1	Q6ZQY3	521 aa		11.86	□□□□□ -0.51
MACF1-222	ENST00000494012	KIAA1211	Q6ZU35	1233 aa		11.86	□□□□□ -0.51

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