RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 NAA16Q6N069 864 aaPredicted RBP13.51□□□□□ -0.25
SNRNP200-207ENST00000493271 CRACR2BQ8N4Y2 399 aaPredicted RBP13.51□□□□□ -0.25
SNRNP200-207ENST00000493271 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
SNRNP200-207ENST00000493271 STXBP5LQ9Y2K9 1186 aa13.51□□□□□ -0.25
SNRNP200-207ENST00000493271 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 IPO8O15397 1037 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 GNAI2P04899 355 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 COL6A1P12109 1028 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 CYP2B6P20813 491 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 MCAMP43121 646 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 MAGEA10P43363 369 aaPredicted RBP13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 CCDC158Q5M9N0 1113 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 TBC1D9Q6ZT07 1266 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 DEFB123Q8N688 67 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 SH3RF3Q8TEJ3 882 aaPredicted RBP13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 P2RX7Q99572 595 aaKnown RBP13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 GPR108Q9NPR9 543 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 ZMYND8Q9ULU4 1186 aaPredicted RBP13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 MAST2Q6P0Q8 1798 aa13.5□□□□□ -0.25
SNRNP200-207ENST00000493271 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 ERVK-9P63128 1117 aa13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 ERVK-24P63145 666 aa13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 CCNA1P78396 465 aa13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 TRIM32Q13049 653 aa13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 RRP1BQ14684 758 aaKnown RBP13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 USP6NLQ92738 828 aa13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 ZNF512BQ96KM6 892 aaPredicted RBP13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 APBA2Q99767 749 aa13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 AATFQ9NY61 560 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNRNP200-207ENST00000493271 A0A0C4DFX4 3053 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 PLXNB2O15031 1838 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 PFASO15067 1338 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 FLT1P17948 1338 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 MSCO60682 206 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 MORN1Q5T089 497 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 USP17L2Q6R6M4 530 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 PLEKHH3Q7Z736 793 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 TGFBRAP1Q8WUH2 860 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 C12orf42Q96LP6 360 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 RBPJLQ9UBG7 517 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 ZBTB21Q9ULJ3 1066 aa13.48□□□□□ -0.25
SNRNP200-207ENST00000493271 SYN1P17600 705 aa13.47□□□□□ -0.25
SNRNP200-207ENST00000493271 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
SNRNP200-207ENST00000493271 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
SNRNP200-207ENST00000493271 GPR142Q7Z601 462 aa13.47□□□□□ -0.25
SNRNP200-207ENST00000493271 DNAJC18Q9H819 358 aa13.47□□□□□ -0.25
SNRNP200-207ENST00000493271 TXNRD2Q9NNW7 524 aa13.47□□□□□ -0.25
SNRNP200-207ENST00000493271 RABGAP1Q9Y3P9 1069 aa13.47□□□□□ -0.25
SNRNP200-207ENST00000493271 SIPA1L1O43166 1804 aa13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 USP14P54578 494 aa13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 MAP2K5Q13163 448 aa13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 LHX8Q68G74 356 aa13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 FAM109BQ6ICB4 259 aaPredicted RBP13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 MAPKAPK5Q8IW41 473 aa13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 EHD4Q9H223 541 aa13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.46□□□□□ -0.25
SNRNP200-207ENST00000493271 FOCADQ5VW36 1801 aa13.46□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L15C9J2P7 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L13C9JLJ4 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L11C9JVI0 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L18D6R9N7 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L22D6RA61 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L17D6RBQ6 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L19D6RCP7 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L20D6RJB6 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 GDF11O95390 407 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 USP17L24Q0WX57 530 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 TNNI3KQ59H18 835 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 MFSD14CQ5VZR4 134 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 TATDN1Q6P1N9 297 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 LBX2Q6XYB7 198 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 EDC3Q96F86 508 aaKnown RBP13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 PAGR1Q9BTK6 254 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 PORCNQ9H237 461 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 PALD1Q9ULE6 856 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 FPGT-TNNI3KV9GXZ4 949 aa13.45□□□□□ -0.26
SNRNP200-207ENST00000493271 PNMA6EA0A0J9YXQ4 647 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 SLC15A5A6NIM6 579 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 CYP2E1P05181 493 aaPredicted RBP13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 HOXC6P09630 235 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 JAG1P78504 1218 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 Q3C1V9 767 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 FEZ1Q99689 392 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 LBHD1Q9BQE6 289 aaPredicted RBP13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 KIAA1683Q9H0B3 1180 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 IVNS1ABPQ9Y6Y0 642 aa13.44□□□□□ -0.26
SNRNP200-207ENST00000493271 GH2P01242 217 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 TRIM27P14373 513 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 CCND3P30281 292 aaPredicted RBP13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 OS9Q13438 667 aaPredicted RBP13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 POLA2Q14181 598 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms