RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
MSH6-208ENST00000493177 HSPD1P10809 573 aaKnown RBP15.99■□□□□ 0.15
MSH6-208ENST00000493177 PTH1RQ03431 593 aa15.99■□□□□ 0.15
MSH6-208ENST00000493177 PKN2Q16513 984 aaKnown RBP15.99■□□□□ 0.15
MSH6-208ENST00000493177 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
MSH6-208ENST00000493177 ERO1AQ96HE7 468 aa15.99■□□□□ 0.15
MSH6-208ENST00000493177 PTPN18Q99952 460 aa15.99■□□□□ 0.15
MSH6-208ENST00000493177 NACAP1Q9BZK3 213 aa15.99■□□□□ 0.15
MSH6-208ENST00000493177 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
MSH6-208ENST00000493177 NAV1Q8NEY1 1877 aa15.99■□□□□ 0.15
MSH6-208ENST00000493177 ATRNL1Q5VV63 1379 aa15.99■□□□□ 0.15
MSH6-208ENST00000493177 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
MSH6-208ENST00000493177 TDO2P48775 406 aa15.98■□□□□ 0.15
MSH6-208ENST00000493177 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
MSH6-208ENST00000493177 DSCC1Q9BVC3 393 aa15.98■□□□□ 0.15
MSH6-208ENST00000493177 DHX36Q9H2U1 1008 aaKnown RBP15.98■□□□□ 0.15
MSH6-208ENST00000493177 TRIM17Q9Y577 477 aa15.98■□□□□ 0.15
MSH6-208ENST00000493177 ZHX2Q9Y6X8 837 aa15.98■□□□□ 0.15
MSH6-208ENST00000493177 FLT1P17948 1338 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 BTBD19C9JJ37 291 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 CTNND1O60716 968 aaKnown RBP15.97■□□□□ 0.15
MSH6-208ENST00000493177 SP3Q02447 781 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 SLC4A8Q2Y0W8 1093 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 GADL1Q6ZQY3 521 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 IFNL3Q8IZI9 196 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 CD99L2Q8TCZ2 262 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 NAPBQ9H115 298 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 ATP8A2Q9NTI2 1148 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 PI4KBQ9UBF8 816 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 SAP30BPQ9UHR5 308 aaKnown RBP15.97■□□□□ 0.15
MSH6-208ENST00000493177 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
MSH6-208ENST00000493177 PTPRFP10586 1907 aa15.97■□□□□ 0.15
MSH6-208ENST00000493177 PHIPQ8WWQ0 1821 aa15.96■□□□□ 0.15
MSH6-208ENST00000493177 GSG1L2A8MUP6 293 aa15.96■□□□□ 0.15
MSH6-208ENST00000493177 TBC1D12O60347 775 aa15.96■□□□□ 0.15
MSH6-208ENST00000493177 SLURP2P0DP57 97 aa15.96■□□□□ 0.15
MSH6-208ENST00000493177 MCCP23508 829 aa15.96■□□□□ 0.15
MSH6-208ENST00000493177 ARHGEF6Q15052 776 aa15.96■□□□□ 0.15
MSH6-208ENST00000493177 HERC5Q9UII4 1024 aaKnown RBP15.96■□□□□ 0.15
MSH6-208ENST00000493177 RBM8AQ9Y5S9 174 aaKnown RBP15.96■□□□□ 0.15
MSH6-208ENST00000493177 SIPA1L1O43166 1804 aa15.96■□□□□ 0.14
MSH6-208ENST00000493177 PHF20L1A8MW92 1017 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 CXCL11O14625 94 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 PTPRAP18433 802 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 KIF22Q14807 665 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 AMOTL1Q8IY63 956 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 MAP4K1Q92918 833 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 USP26Q9BXU7 913 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 EPB41L4AQ9HCS5 686 aaPredicted RBP15.95■□□□□ 0.14
MSH6-208ENST00000493177 ZCCHC17Q9NP64 241 aaKnown RBP15.95■□□□□ 0.14
MSH6-208ENST00000493177 DCP1AQ9NPI6 582 aaPredicted RBP15.95■□□□□ 0.14
MSH6-208ENST00000493177 CTNNA3Q9UI47 895 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 KCNH4Q9UQ05 1017 aa15.95■□□□□ 0.14
MSH6-208ENST00000493177 MYH8P13535 1937 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 PDHXO00330 501 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 FOXP2O15409 715 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 FGAP02671 866 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 POLR3DP05423 398 aaPredicted RBP15.94■□□□□ 0.14
MSH6-208ENST00000493177 MAP3K10Q02779 954 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 GIMAP6Q6P9H5 292 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 FBXO46Q6PJ61 603 aaPredicted RBP15.94■□□□□ 0.14
MSH6-208ENST00000493177 FASTKD5Q7L8L6 764 aaKnown RBP15.94■□□□□ 0.14
MSH6-208ENST00000493177 ANKRD23Q86SG2 305 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 MCM9Q9NXL9 1143 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 PALD1Q9ULE6 856 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 HPS5Q9UPZ3 1129 aa15.94■□□□□ 0.14
MSH6-208ENST00000493177 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
MSH6-208ENST00000493177 EPB41L2O43491 1005 aaKnown RBP15.93■□□□□ 0.14
MSH6-208ENST00000493177 ECM2O94769 699 aaPredicted RBP15.93■□□□□ 0.14
MSH6-208ENST00000493177 ALX1Q15699 326 aa15.93■□□□□ 0.14
MSH6-208ENST00000493177 IMMTQ16891 758 aaKnown RBP15.93■□□□□ 0.14
MSH6-208ENST00000493177 CCDC84Q86UT8 332 aaPredicted RBP15.93■□□□□ 0.14
MSH6-208ENST00000493177 PARK7Q99497 189 aaKnown RBP15.93■□□□□ 0.14
MSH6-208ENST00000493177 EFCC1Q9HA90 598 aa15.93■□□□□ 0.14
MSH6-208ENST00000493177 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.93■□□□□ 0.14
MSH6-208ENST00000493177 USP17L12C9JPN9 530 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 USP17L21D6R901 530 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 TLR2O60603 784 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 HAND2P61296 217 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 RNF20Q5VTR2 975 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 OTOP1Q7RTM1 612 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 TTC6Q86TZ1 520 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 FOXP4Q8IVH2 680 aaPredicted RBP15.92■□□□□ 0.14
MSH6-208ENST00000493177 TBC1D2Q9BYX2 928 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 C22orf23Q9BZE7 217 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 ARPP21Q9UBL0 812 aaPredicted RBP15.92■□□□□ 0.14
MSH6-208ENST00000493177 AFG3L2Q9Y4W6 797 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 ZMYM6O95789 1325 aa15.92■□□□□ 0.14
MSH6-208ENST00000493177 A0A0G2JLL6 359 aaPredicted RBP15.91■□□□□ 0.14
MSH6-208ENST00000493177 USP17L5A8MUK1 530 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 ZNF213O14771 459 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 SLC27A2O14975 620 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 GDF11O95390 407 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 CYP2D6P10635 497 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 CAP2P40123 477 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 CREB3L3Q68CJ9 461 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 CTR9Q6PD62 1173 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 PRRT2Q7Z6L0 340 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms