RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PNMA3Q9UL41 463 aa19.1■□□□□ 0.65
COL2A1-207ENST00000490609 NDUFB9Q9Y6M9 179 aa19.1■□□□□ 0.65
COL2A1-207ENST00000490609 HOXA7P31268 230 aaPredicted RBP19.09■□□□□ 0.65
COL2A1-207ENST00000490609 GCLCP48506 637 aaPredicted RBP19.09■□□□□ 0.65
COL2A1-207ENST00000490609 MTMR2Q13614 643 aa19.09■□□□□ 0.65
COL2A1-207ENST00000490609 DIS3LQ8TF46 1054 aaKnown RBP19.09■□□□□ 0.65
COL2A1-207ENST00000490609 COA7Q96BR5 231 aa19.09■□□□□ 0.65
COL2A1-207ENST00000490609 CCDC8Q9H0W5 538 aaPredicted RBP19.09■□□□□ 0.65
COL2A1-207ENST00000490609 DDX60LQ5H9U9 1706 aaKnown RBP19.08■□□□□ 0.65
COL2A1-207ENST00000490609 GDF11O95390 407 aa19.08■□□□□ 0.64
COL2A1-207ENST00000490609 Q3C1V9 767 aa19.08■□□□□ 0.64
COL2A1-207ENST00000490609 CCDC158Q5M9N0 1113 aa19.08■□□□□ 0.64
COL2A1-207ENST00000490609 FOXP4Q8IVH2 680 aaPredicted RBP19.08■□□□□ 0.64
COL2A1-207ENST00000490609 RBPJLQ9UBG7 517 aa19.08■□□□□ 0.64
COL2A1-207ENST00000490609 BAG3O95817 575 aa19.07■□□□□ 0.64
COL2A1-207ENST00000490609 TFRCP02786 760 aaKnown RBP19.07■□□□□ 0.64
COL2A1-207ENST00000490609 PAWRQ96IZ0 340 aaKnown RBP19.07■□□□□ 0.64
COL2A1-207ENST00000490609 HTATIP2Q9BUP3 242 aa19.07■□□□□ 0.64
COL2A1-207ENST00000490609 ANTXR1Q9H6X2 564 aa19.07■□□□□ 0.64
COL2A1-207ENST00000490609 EMILIN3Q9NT22 766 aa19.07■□□□□ 0.64
COL2A1-207ENST00000490609 SAP30BPQ9UHR5 308 aaKnown RBP19.07■□□□□ 0.64
COL2A1-207ENST00000490609 RLFQ13129 1914 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 ASNSP08243 561 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 PLCG2P16885 1265 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 TRIB2Q92519 343 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 USP6NLQ92738 828 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL2A1-207ENST00000490609 TAOK2Q9UL54 1235 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 ZBTB21Q9ULJ3 1066 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 FRMPD3Q5JV73 1810 aa19.06■□□□□ 0.64
COL2A1-207ENST00000490609 HERVK_113P62684 666 aa19.05■□□□□ 0.64
COL2A1-207ENST00000490609 MAP3K21Q5TCX8 1036 aa19.05■□□□□ 0.64
COL2A1-207ENST00000490609 TATDN1Q6P1N9 297 aa19.05■□□□□ 0.64
COL2A1-207ENST00000490609 CEP85Q6P2H3 762 aa19.05■□□□□ 0.64
COL2A1-207ENST00000490609 AS3MTQ9HBK9 375 aa19.05■□□□□ 0.64
COL2A1-207ENST00000490609 USP17L10C9JJH3 530 aa19.04■□□□□ 0.64
COL2A1-207ENST00000490609 HMGCRP04035 888 aa19.04■□□□□ 0.64
COL2A1-207ENST00000490609 CYP7A1P22680 504 aa19.04■□□□□ 0.64
COL2A1-207ENST00000490609 PABPC4Q13310 644 aaKnown RBP eCLIP19.04■□□□□ 0.64
COL2A1-207ENST00000490609 MIGA1Q8NAN2 632 aa19.04■□□□□ 0.64
COL2A1-207ENST00000490609 C19orf81C9J6K1 198 aa19.03■□□□□ 0.64
COL2A1-207ENST00000490609 SOX1O00570 391 aaPredicted RBP19.03■□□□□ 0.64
COL2A1-207ENST00000490609 IGSF3O75054 1194 aa19.03■□□□□ 0.64
COL2A1-207ENST00000490609 CNMDO75829 334 aa19.03■□□□□ 0.64
COL2A1-207ENST00000490609 EVX2Q03828 476 aa19.03■□□□□ 0.64
COL2A1-207ENST00000490609 OS9Q13438 667 aaPredicted RBP19.03■□□□□ 0.64
COL2A1-207ENST00000490609 NOL10Q9BSC4 688 aaKnown RBP19.03■□□□□ 0.64
COL2A1-207ENST00000490609 PORCNQ9H237 461 aa19.03■□□□□ 0.64
COL2A1-207ENST00000490609 RPTORQ8N122 1335 aa19.02■□□□□ 0.64
COL2A1-207ENST00000490609 CAPN2P17655 700 aa19.02■□□□□ 0.64
COL2A1-207ENST00000490609 CYP2B6P20813 491 aa19.02■□□□□ 0.64
COL2A1-207ENST00000490609 ITPRIPQ8IWB1 547 aa19.02■□□□□ 0.64
COL2A1-207ENST00000490609 GINM1Q9NU53 330 aa19.02■□□□□ 0.64
COL2A1-207ENST00000490609 NR2E3Q9Y5X4 410 aa19.02■□□□□ 0.64
COL2A1-207ENST00000490609 NAV1Q8NEY1 1877 aa19.02■□□□□ 0.64
COL2A1-207ENST00000490609 EVI5O60447 810 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 GH2P01242 217 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 GUCY1A2P33402 732 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 MORN1Q5T089 497 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 MIER1Q8N108 512 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 MAGEB6Q8N7X4 407 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 GPRC5AQ8NFJ5 357 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 RIOK1Q9BRS2 568 aaKnown RBP19.01■□□□□ 0.63
COL2A1-207ENST00000490609 STAP2Q9UGK3 403 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 OGDHLQ9ULD0 1010 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
COL2A1-207ENST00000490609 ZNFX1Q9P2E3 1918 aaKnown RBP19■□□□□ 0.63
COL2A1-207ENST00000490609 BAZ2AQ9UIF9 1905 aaKnown RBP19■□□□□ 0.63
COL2A1-207ENST00000490609 IDH1O75874 414 aaKnown RBP19■□□□□ 0.63
COL2A1-207ENST00000490609 PLCD1P51178 756 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 ERVK-9P63128 1117 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 ERVK-24P63145 666 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
COL2A1-207ENST00000490609 CCL14Q16627 93 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 CRACR2BQ8N4Y2 399 aaPredicted RBP19■□□□□ 0.63
COL2A1-207ENST00000490609 ANKLE1Q8NAG6 615 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 ACER1Q8TDN7 264 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 PANK1Q8TE04 598 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 C12orf42Q96LP6 360 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 HMX1Q9NP08 348 aaPredicted RBP19■□□□□ 0.63
COL2A1-207ENST00000490609 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
COL2A1-207ENST00000490609 XRCC5P13010 732 aaKnown RBP18.99■□□□□ 0.63
COL2A1-207ENST00000490609 SHMT1P34896 483 aa18.99■□□□□ 0.63
COL2A1-207ENST00000490609 HNRNPUQ00839 825 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL2A1-207ENST00000490609 LHX8Q68G74 356 aa18.99■□□□□ 0.63
COL2A1-207ENST00000490609 NECAB2Q7Z6G3 386 aa18.99■□□□□ 0.63
COL2A1-207ENST00000490609 GDF15Q99988 308 aa18.99■□□□□ 0.63
COL2A1-207ENST00000490609 EHD4Q9H223 541 aa18.99■□□□□ 0.63
COL2A1-207ENST00000490609 PARP14Q460N5 1801 aa18.99■□□□□ 0.63
COL2A1-207ENST00000490609 MYH8P13535 1937 aa18.98■□□□□ 0.63
COL2A1-207ENST00000490609 PRKAR2AP13861 404 aaKnown RBP18.98■□□□□ 0.63
COL2A1-207ENST00000490609 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
COL2A1-207ENST00000490609 USP17L2Q6R6M4 530 aa18.98■□□□□ 0.63
COL2A1-207ENST00000490609 GPR142Q7Z601 462 aa18.98■□□□□ 0.63
COL2A1-207ENST00000490609 SIRT2Q8IXJ6 389 aa18.98■□□□□ 0.63
COL2A1-207ENST00000490609 PFASO15067 1338 aa18.98■□□□□ 0.63
COL2A1-207ENST00000490609 UNC80Q8N2C7 3258 aa18.98■□□□□ 0.63
COL2A1-207ENST00000490609 IGHA2P01877 340 aa18.97■□□□□ 0.63
COL2A1-207ENST00000490609 HLA-DOAP06340 250 aa18.97■□□□□ 0.63
COL2A1-207ENST00000490609 GABPAQ06546 454 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms