RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 PNMA6EA0A0J9YXQ4 647 aa14.4□□□□□ -0.1
FDPS-215ENST00000490140 XRCC5P13010 732 aaKnown RBP14.4□□□□□ -0.1
FDPS-215ENST00000490140 TGFBRAP1Q8WUH2 860 aa14.4□□□□□ -0.1
FDPS-215ENST00000490140 LAMA3Q16787 3333 aa14.4□□□□□ -0.1
FDPS-215ENST00000490140 GLRX3O76003 335 aaKnown RBP14.39□□□□□ -0.11
FDPS-215ENST00000490140 SLURP2P0DP57 97 aa14.39□□□□□ -0.11
FDPS-215ENST00000490140 ZKSCAN1P17029 563 aaPredicted RBP14.39□□□□□ -0.11
FDPS-215ENST00000490140 HERVK_113P62684 666 aa14.39□□□□□ -0.11
FDPS-215ENST00000490140 METTL16Q86W50 562 aaKnown RBP14.39□□□□□ -0.11
FDPS-215ENST00000490140 MAPKAPK5Q8IW41 473 aa14.39□□□□□ -0.11
FDPS-215ENST00000490140 CLUAP1Q96AJ1 413 aa14.39□□□□□ -0.11
FDPS-215ENST00000490140 FEZ1Q99689 392 aa14.39□□□□□ -0.11
FDPS-215ENST00000490140 ZBTB21Q9ULJ3 1066 aa14.39□□□□□ -0.11
FDPS-215ENST00000490140 CDK5RAP2Q96SN8 1893 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 SURF6O75683 361 aaKnown RBP14.38□□□□□ -0.11
FDPS-215ENST00000490140 RGS2P41220 211 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 CCNA1P78396 465 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 SSH3Q8TE77 659 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 C11orf49Q9H6J7 331 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 SNRKQ9NRH2 765 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
FDPS-215ENST00000490140 PRKAR2AP13861 404 aaKnown RBP14.37□□□□□ -0.11
FDPS-215ENST00000490140 USP14P54578 494 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 ERVK-9P63128 1117 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 ERVK-24P63145 666 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 POLA2Q14181 598 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 GPR153Q6NV75 609 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 USP17L2Q6R6M4 530 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 C7orf61Q8IZ16 206 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 APBA2Q99767 749 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 PALD1Q9ULE6 856 aa14.37□□□□□ -0.11
FDPS-215ENST00000490140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.37□□□□□ -0.11
FDPS-215ENST00000490140 DDX60LQ5H9U9 1706 aaKnown RBP14.36□□□□□ -0.11
FDPS-215ENST00000490140 IDH1O75874 414 aaKnown RBP14.36□□□□□ -0.11
FDPS-215ENST00000490140 GDF11O95390 407 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 CYP2E1P05181 493 aaPredicted RBP14.36□□□□□ -0.11
FDPS-215ENST00000490140 BMP8BP34820 402 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 USP5P45974 858 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 MAP3K12Q12852 859 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 MAP3K21Q5TCX8 1036 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 ERC1Q8IUD2 1116 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 TMEM57Q8N5G2 664 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 TRIB2Q92519 343 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 DBNDD2Q9BQY9 259 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 EHD4Q9H223 541 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 OGDHLQ9ULD0 1010 aa14.36□□□□□ -0.11
FDPS-215ENST00000490140 MYH1P12882 1939 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 ALPK3Q96L96 1907 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 BCAR3O75815 825 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 CYP2B6P20813 491 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 CYP7A1P22680 504 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 ATP8B2P98198 1209 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 RRP1BQ14684 758 aaKnown RBP14.35□□□□□ -0.11
FDPS-215ENST00000490140 PLEKHH3Q7Z736 793 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 TTC6Q86TZ1 520 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 DIS3LQ8TF46 1054 aaKnown RBP14.35□□□□□ -0.11
FDPS-215ENST00000490140 P2RX7Q99572 595 aaKnown RBP14.35□□□□□ -0.11
FDPS-215ENST00000490140 PAGR1Q9BTK6 254 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 DNAJC18Q9H819 358 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 SERPINB13Q9UIV8 391 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 RABGAP1Q9Y3P9 1069 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 IVNS1ABPQ9Y6Y0 642 aa14.35□□□□□ -0.11
FDPS-215ENST00000490140 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 ZAP70P43403 619 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 GPR142Q7Z601 462 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 C12orf42Q96LP6 360 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 CABP5Q9NP86 173 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 STAP2Q9UGK3 403 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 SAP30BPQ9UHR5 308 aaKnown RBP14.34□□□□□ -0.11
FDPS-215ENST00000490140 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
FDPS-215ENST00000490140 PLXNB2O15031 1838 aa14.34□□□□□ -0.11
FDPS-215ENST00000490140 MSCO60682 206 aa14.33□□□□□ -0.12
FDPS-215ENST00000490140 GH2P01242 217 aa14.33□□□□□ -0.12
FDPS-215ENST00000490140 TTF1Q15361 905 aaPredicted RBP14.33□□□□□ -0.12
FDPS-215ENST00000490140 HSP90AB4PQ58FF6 505 aa14.33□□□□□ -0.12
FDPS-215ENST00000490140 MFSD14CQ5VZR4 134 aa14.33□□□□□ -0.12
FDPS-215ENST00000490140 ADGRA1Q86SQ6 560 aa14.33□□□□□ -0.12
FDPS-215ENST00000490140 GDF15Q99988 308 aa14.33□□□□□ -0.12
FDPS-215ENST00000490140 DBNLQ9UJU6 430 aaKnown RBP14.33□□□□□ -0.12
FDPS-215ENST00000490140 TRIM32Q13049 653 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 RAB3GAP1Q15042 981 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 ABCB5Q2M3G0 1257 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 CERKLQ49MI3 558 aaPredicted RBP14.32□□□□□ -0.12
FDPS-215ENST00000490140 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 TATDN1Q6P1N9 297 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 MAGEB6Q8N7X4 407 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 TXNRD2Q9NNW7 524 aa14.32□□□□□ -0.12
FDPS-215ENST00000490140 PIH1D3Q9NQM4 214 aaKnown RBP14.32□□□□□ -0.12
FDPS-215ENST00000490140 RBPJLQ9UBG7 517 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms