RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
YIPF3-207ENST00000488966 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
YIPF3-207ENST00000488966 SOCS4Q8WXH5 440 aa13.25□□□□□ -0.29
YIPF3-207ENST00000488966 NUDT12Q9BQG2 462 aa13.25□□□□□ -0.29
YIPF3-207ENST00000488966 NOL10Q9BSC4 688 aaKnown RBP13.25□□□□□ -0.29
YIPF3-207ENST00000488966 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
YIPF3-207ENST00000488966 PALD1Q9ULE6 856 aa13.25□□□□□ -0.29
YIPF3-207ENST00000488966 LAMA3Q16787 3333 aa13.25□□□□□ -0.29
YIPF3-207ENST00000488966 PFASO15067 1338 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 FLT1P17948 1338 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 C19orf81C9J6K1 198 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 USP17L10C9JJH3 530 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 GDF11O95390 407 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
YIPF3-207ENST00000488966 TRIM27P14373 513 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 PLCG2P16885 1265 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 Q3C1V9 767 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
YIPF3-207ENST00000488966 USP6NLQ92738 828 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 PORCNQ9H237 461 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
YIPF3-207ENST00000488966 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
YIPF3-207ENST00000488966 COL6A1P12109 1028 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
YIPF3-207ENST00000488966 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
YIPF3-207ENST00000488966 ERVK-9P63128 1117 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 ERVK-24P63145 666 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 CACNB2Q08289 660 aaPredicted RBP13.23□□□□□ -0.29
YIPF3-207ENST00000488966 CCL14Q16627 93 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 LRIT3Q3SXY7 679 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 MORN1Q5T089 497 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 Q7L0L9 218 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 DEFB123Q8N688 67 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 DBNDD2Q9BQY9 259 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 PAGR1Q9BTK6 254 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
YIPF3-207ENST00000488966 ALPK3Q96L96 1907 aa13.23□□□□□ -0.29
YIPF3-207ENST00000488966 MAPK4P31152 587 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 TNNI3KQ59H18 835 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 LHX8Q68G74 356 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 GPR142Q7Z601 462 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
YIPF3-207ENST00000488966 TDHQ8IZJ6 230 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 TRIM34Q9BYJ4 488 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 PIH1D3Q9NQM4 214 aaKnown RBP13.22□□□□□ -0.29
YIPF3-207ENST00000488966 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 FPGT-TNNI3KV9GXZ4 949 aa13.22□□□□□ -0.29
YIPF3-207ENST00000488966 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
YIPF3-207ENST00000488966 RGS2P41220 211 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 DYNLL1P63167 89 aaKnown RBP13.21□□□□□ -0.29
YIPF3-207ENST00000488966 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 ATF7IPQ6VMQ6 1270 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 CCAR1Q8IX12 1150 aaKnown RBP13.21□□□□□ -0.29
YIPF3-207ENST00000488966 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 UBE2OQ9C0C9 1292 aaKnown RBP13.21□□□□□ -0.29
YIPF3-207ENST00000488966 GPR108Q9NPR9 543 aa13.21□□□□□ -0.29
YIPF3-207ENST00000488966 PLXNB2O15031 1838 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 DDX60LQ5H9U9 1706 aaKnown RBP13.2□□□□□ -0.3
YIPF3-207ENST00000488966 BCAR3O75815 825 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 GH2P01242 217 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 ZAP70P43403 619 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 POLA2Q14181 598 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 GTF3C2Q8WUA4 911 aaPredicted RBP13.2□□□□□ -0.3
YIPF3-207ENST00000488966 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
YIPF3-207ENST00000488966 ZNF512BQ96KM6 892 aaPredicted RBP13.2□□□□□ -0.3
YIPF3-207ENST00000488966 APBA2Q99767 749 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 MTMR10Q9NXD2 777 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 STXBP5LQ9Y2K9 1186 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 NDUFB9Q9Y6M9 179 aa13.2□□□□□ -0.3
YIPF3-207ENST00000488966 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
YIPF3-207ENST00000488966 CNMDO75829 334 aa13.19□□□□□ -0.3
YIPF3-207ENST00000488966 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
YIPF3-207ENST00000488966 CYP7A1P22680 504 aa13.19□□□□□ -0.3
YIPF3-207ENST00000488966 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
YIPF3-207ENST00000488966 OS9Q13438 667 aaPredicted RBP13.19□□□□□ -0.3
YIPF3-207ENST00000488966 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
YIPF3-207ENST00000488966 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
YIPF3-207ENST00000488966 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
YIPF3-207ENST00000488966 C12orf42Q96LP6 360 aa13.19□□□□□ -0.3
YIPF3-207ENST00000488966 COL6A3P12111 3177 aa13.18□□□□□ -0.3
YIPF3-207ENST00000488966 SURF6O75683 361 aaKnown RBP13.18□□□□□ -0.3
YIPF3-207ENST00000488966 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
YIPF3-207ENST00000488966 SSH3Q8TE77 659 aa13.18□□□□□ -0.3
YIPF3-207ENST00000488966 FEZ1Q99689 392 aa13.18□□□□□ -0.3
YIPF3-207ENST00000488966 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
YIPF3-207ENST00000488966 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
YIPF3-207ENST00000488966 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
YIPF3-207ENST00000488966 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
YIPF3-207ENST00000488966 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L15C9J2P7 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L13C9JLJ4 530 aa13.17□□□□□ -0.3
YIPF3-207ENST00000488966 USP17L11C9JVI0 530 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms