RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 C19orf73Q9NVV2 129 aa4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 SMG5Q9UPR3 1016 aaKnown RBP4.99□□□□□ -1.61
R3HDM1-219ENST00000488035 PNMA6FA0A0J9YX94 578 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 XRCC5P13010 732 aaKnown RBP4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 ZNF16P17020 682 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 LINC00310P59036 64 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 KRTAP10-2P60368 255 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 PLCB3Q01970 1234 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 MAP1SQ66K74 1059 aaPredicted RBP4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 SULF2Q8IWU5 870 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 ABHD4Q8TB40 342 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 GIPC2Q8TF65 315 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 KCNN1Q92952 543 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 ACSBG1Q96GR2 724 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 BCL2L13Q9BXK5 485 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 ATP13A1Q9HD20 1204 aa4.98□□□□□ -1.61
R3HDM1-219ENST00000488035 ETV2O00321 342 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 EIF1AYO14602 144 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 FANCGO15287 622 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 SRFP11831 508 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 ERCC3P19447 782 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 ENOX2Q16206 610 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 PI16Q6UXB8 463 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 HSPA12BQ96MM6 686 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 ALPK1Q96QP1 1244 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 PARD6AQ9NPB6 346 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 SEMA3GQ9NS98 782 aa4.97□□□□□ -1.61
R3HDM1-219ENST00000488035 RBM47A0AV96 593 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 EOMESO95936 686 aa4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 LDHBP07195 334 aaKnown RBP4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 NME2P22392 152 aa4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 GRM2Q14416 872 aa4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 EAPPQ56P03 285 aaPredicted RBP4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 C22orf34Q6ZV56 151 aa4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 THAP5Q7Z6K1 395 aa4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 MFSD4AQ8N468 514 aa4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 FAM161BQ96MY7 647 aa4.96□□□□□ -1.62
R3HDM1-219ENST00000488035 FOXD2O60548 495 aaPredicted RBP4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 LRIG2O94898 1065 aa4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 RBM25P49756 843 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 PPM1JQ5JR12 505 aa4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 CDKAL1Q5VV42 579 aa4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 ARMCX6Q7L4S7 300 aa4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 GPBAR1Q8TDU6 330 aa4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 EPS8L3Q8TE67 593 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 ZCCHC4Q9H5U6 513 aa4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 TPX2Q9ULW0 747 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 SAMM50Q9Y512 469 aa4.95□□□□□ -1.62
R3HDM1-219ENST00000488035 FCGRTP55899 365 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 SFRP5Q5T4F7 317 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 ZBTB37Q5TC79 503 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 ZNF746Q6NUN9 644 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 TTC6Q86TZ1 520 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 MYLIPQ8WY64 445 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 DUSP9Q99956 384 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 IRF2BPLQ9H1B7 796 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 CBX8Q9HC52 389 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 CACNA2D2Q9NY47 1150 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 SLAMF8Q9P0V8 285 aa4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 KIAA1522Q9P206 1035 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-219ENST00000488035 H3BS24 57 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 RBAK-RBAKDNI3L0D1 243 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 PRPF40AO75400 957 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 NTF4P34130 210 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 RING1Q06587 406 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 ZNF252P-AS1Q0IIN9 211 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 ZNF507Q8TCN5 953 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 STK35Q8TDR2 534 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 COX4I2Q96KJ9 171 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 NLRP2Q9NX02 1062 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 CSADQ9Y600 493 aa4.93□□□□□ -1.62
R3HDM1-219ENST00000488035 A0A0G2JLL6 359 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 TRIM37O94972 964 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 SYN1P17600 705 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 SCARA3Q6AZY7 606 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 NPM2Q86SE8 214 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 GGNQ86UU5 652 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 C12orf40Q86WS4 652 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 UBE2FQ969M7 185 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 MRRFQ96E11 262 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 PARP2Q9UGN5 583 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 ST14Q9Y5Y6 855 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 CAPN6Q9Y6Q1 641 aa4.92□□□□□ -1.62
R3HDM1-219ENST00000488035 DCDC2CA8MYV0 355 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 PRR33A8MZF0 331 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 SLITRK5O94991 958 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 BMP7P18075 431 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 CYP7A1P22680 504 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 FGD1P98174 961 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 TMPRSS7Q7RTY8 843 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 UBE3DQ7Z6J8 389 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 BAHD1Q8TBE0 780 aaPredicted RBP4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 OSBPL7Q9BZF2 842 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 TMEM59LQ9UK28 342 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 AKAP2Q9Y2D5 859 aa4.91□□□□□ -1.62
R3HDM1-219ENST00000488035 SEMA7AO75326 666 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 HPXP02790 462 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 DAB2P98082 770 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 NFKB2Q00653 900 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms