RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
OPTN-212ENST00000487935 DBNLQ9UJU6 430 aaKnown RBP14.89□□□□□ -0.03
OPTN-212ENST00000487935 TFRCP02786 760 aaKnown RBP14.88□□□□□ -0.03
OPTN-212ENST00000487935 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
OPTN-212ENST00000487935 CYP7A1P22680 504 aa14.88□□□□□ -0.03
OPTN-212ENST00000487935 BACE1P56817 501 aa14.88□□□□□ -0.03
OPTN-212ENST00000487935 MTMR2Q13614 643 aa14.88□□□□□ -0.03
OPTN-212ENST00000487935 EAF2Q96CJ1 260 aaPredicted RBP14.88□□□□□ -0.03
OPTN-212ENST00000487935 DNAJC18Q9H819 358 aa14.88□□□□□ -0.03
OPTN-212ENST00000487935 TLR7Q9NYK1 1049 aaKnown RBP14.88□□□□□ -0.03
OPTN-212ENST00000487935 PALD1Q9ULE6 856 aa14.88□□□□□ -0.03
OPTN-212ENST00000487935 DOCK3Q8IZD9 2030 aa14.87□□□□□ -0.03
OPTN-212ENST00000487935 C19orf81C9J6K1 198 aa14.87□□□□□ -0.03
OPTN-212ENST00000487935 IDH1O75874 414 aaKnown RBP14.87□□□□□ -0.03
OPTN-212ENST00000487935 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
OPTN-212ENST00000487935 DYNLL1P63167 89 aaKnown RBP14.87□□□□□ -0.03
OPTN-212ENST00000487935 IRX3P78415 501 aaPredicted RBP14.87□□□□□ -0.03
OPTN-212ENST00000487935 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
OPTN-212ENST00000487935 DEFB118Q96PH6 123 aa14.87□□□□□ -0.03
OPTN-212ENST00000487935 PAK6Q9NQU5 681 aaPredicted RBP14.87□□□□□ -0.03
OPTN-212ENST00000487935 SAP30BPQ9UHR5 308 aaKnown RBP14.87□□□□□ -0.03
OPTN-212ENST00000487935 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
OPTN-212ENST00000487935 USP17L10C9JJH3 530 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 GDF11O95390 407 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 USP5P45974 858 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 JAG1P78504 1218 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 CEP85Q6P2H3 762 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 MORF4L1Q9UBU8 362 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 NR2E3Q9Y5X4 410 aa14.86□□□□□ -0.03
OPTN-212ENST00000487935 ERC1Q8IUD2 1116 aa14.85□□□□□ -0.03
OPTN-212ENST00000487935 MAGEB6Q8N7X4 407 aa14.85□□□□□ -0.03
OPTN-212ENST00000487935 P2RX7Q99572 595 aaKnown RBP14.85□□□□□ -0.03
OPTN-212ENST00000487935 GJD2Q9UKL4 321 aa14.85□□□□□ -0.03
OPTN-212ENST00000487935 ZBTB21Q9ULJ3 1066 aa14.85□□□□□ -0.03
OPTN-212ENST00000487935 MYH1P12882 1939 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 HMGCRP04035 888 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 HERVK_113P62684 666 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 MAP3K12Q12852 859 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 SHROOM1Q2M3G4 852 aaPredicted RBP14.84□□□□□ -0.03
OPTN-212ENST00000487935 TMED8Q6PL24 325 aaPredicted RBP14.84□□□□□ -0.03
OPTN-212ENST00000487935 MIGA1Q8NAN2 632 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 CRISPLD2Q9H0B8 497 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.84□□□□□ -0.03
OPTN-212ENST00000487935 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
OPTN-212ENST00000487935 EXOC6BQ9Y2D4 811 aa14.84□□□□□ -0.03
OPTN-212ENST00000487935 HSP90AB4PQ58FF6 505 aa14.83□□□□□ -0.04
OPTN-212ENST00000487935 USP17L2Q6R6M4 530 aa14.83□□□□□ -0.04
OPTN-212ENST00000487935 AACSQ86V21 672 aa14.83□□□□□ -0.04
OPTN-212ENST00000487935 GPRC5AQ8NFJ5 357 aa14.83□□□□□ -0.04
OPTN-212ENST00000487935 GTF3C2Q8WUA4 911 aaPredicted RBP14.83□□□□□ -0.04
OPTN-212ENST00000487935 ANTXR1Q9H6X2 564 aa14.83□□□□□ -0.04
OPTN-212ENST00000487935 HMX1Q9NP08 348 aaPredicted RBP14.83□□□□□ -0.04
OPTN-212ENST00000487935 RBM27Q9P2N5 1060 aaKnown RBP14.83□□□□□ -0.04
OPTN-212ENST00000487935 NDUFB9Q9Y6M9 179 aa14.83□□□□□ -0.04
OPTN-212ENST00000487935 RPTORQ8N122 1335 aa14.83□□□□□ -0.04
OPTN-212ENST00000487935 EVI5O60447 810 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 GH2P01242 217 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
OPTN-212ENST00000487935 TATDN1Q6P1N9 297 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 NECAB2Q7Z6G3 386 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 TTC6Q86TZ1 520 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 ANKLE1Q8NAG6 615 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 NUDT12Q9BQG2 462 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 EHD4Q9H223 541 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 TXNRD2Q9NNW7 524 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 SERPINB13Q9UIV8 391 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 PLXNB2O15031 1838 aa14.82□□□□□ -0.04
OPTN-212ENST00000487935 CYP2B6P20813 491 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 MAPK4P31152 587 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 ERVK-9P63128 1117 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 ERVK-24P63145 666 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 TRIM32Q13049 653 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 TTF1Q15361 905 aaPredicted RBP14.81□□□□□ -0.04
OPTN-212ENST00000487935 CCAR1Q8IX12 1150 aaKnown RBP14.81□□□□□ -0.04
OPTN-212ENST00000487935 SOCS4Q8WXH5 440 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 PAWRQ96IZ0 340 aaKnown RBP14.81□□□□□ -0.04
OPTN-212ENST00000487935 EMILIN3Q9NT22 766 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 RBPJLQ9UBG7 517 aa14.81□□□□□ -0.04
OPTN-212ENST00000487935 PEX10O60683 326 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 XRCC5P13010 732 aaKnown RBP14.8□□□□□ -0.04
OPTN-212ENST00000487935 USP14P54578 494 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 Q3C1V9 767 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 CERKLQ49MI3 558 aaPredicted RBP14.8□□□□□ -0.04
OPTN-212ENST00000487935 TRMT44Q8IYL2 757 aaKnown RBP14.8□□□□□ -0.04
OPTN-212ENST00000487935 RHPN1Q8TCX5 695 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 TRIB2Q92519 343 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 C12orf42Q96LP6 360 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 FEZ1Q99689 392 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 PAGR1Q9BTK6 254 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 IL1RAPL2Q9NP60 686 aa14.8□□□□□ -0.04
OPTN-212ENST00000487935 MAGEB6P1A0A0J9YX57 407 aa14.79□□□□□ -0.04
OPTN-212ENST00000487935 USP17L15C9J2P7 530 aa14.79□□□□□ -0.04
OPTN-212ENST00000487935 USP17L13C9JLJ4 530 aa14.79□□□□□ -0.04
OPTN-212ENST00000487935 USP17L11C9JVI0 530 aa14.79□□□□□ -0.04
OPTN-212ENST00000487935 USP17L18D6R9N7 530 aa14.79□□□□□ -0.04
OPTN-212ENST00000487935 USP17L22D6RA61 530 aa14.79□□□□□ -0.04
OPTN-212ENST00000487935 USP17L17D6RBQ6 530 aa14.79□□□□□ -0.04
OPTN-212ENST00000487935 USP17L19D6RCP7 530 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms