RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 LNPKQ9C0E8 428 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 TMX4Q9H1E5 349 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-218ENST00000487565 ALG2Q9H553 416 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 IL1RAPL2Q9NP60 686 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 XDHP47989 1333 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 FAM181BA6NEQ2 426 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 SPATA31C2B4DYI2 1134 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 BBOX1O75936 387 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 SASH1O94885 1247 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-218ENST00000487565 KCNJ4P48050 445 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 CHRNDQ07001 517 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 PUM3Q15397 648 aaKnown RBP9.38□□□□□ -0.91
GARNL3-218ENST00000487565 ATP2B3Q16720 1220 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 RIPOR1Q6ZS17 1223 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 TAS1R3Q7RTX0 852 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 AACSQ86V21 672 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 CNTNAP3BQ96NU0 1288 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-218ENST00000487565 GAS2L1Q99501 681 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-218ENST00000487565 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-218ENST00000487565 CNTNAP3Q9BZ76 1288 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 ANKRD2Q9GZV1 360 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 CUEDC1Q9NWM3 386 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-218ENST00000487565 AKAP2Q9Y2D5 859 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 RIPOR2Q9Y4F9 1068 aa9.38□□□□□ -0.91
GARNL3-218ENST00000487565 A0A1B0GUL6 1792 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 ARAP2Q8WZ64 1704 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 A0A0G2JLW4 131 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
GARNL3-218ENST00000487565 IFIT2P09913 472 aaKnown RBP9.37□□□□□ -0.91
GARNL3-218ENST00000487565 SKIP12755 728 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 SLC5A1P13866 664 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 KRT76Q01546 638 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 TNNI3KQ59H18 835 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 TTLL6Q8N841 843 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 VGLL2Q8N8G2 317 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 TIMMDC1Q9NPL8 285 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 GPR108Q9NPR9 543 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 ANKIB1Q9P2G1 1089 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 MINPP1Q9UNW1 487 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 DYRK1BQ9Y463 629 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 ATP6V0A2Q9Y487 856 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 FPGT-TNNI3KV9GXZ4 949 aa9.37□□□□□ -0.91
GARNL3-218ENST00000487565 POM121CA8CG34 1229 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 UFL1O94874 794 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 PDE8BO95263 885 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 IFIT1P09914 478 aaKnown RBP9.36□□□□□ -0.91
GARNL3-218ENST00000487565 CCDC93Q567U6 631 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 DALRD3Q5D0E6 543 aaKnown RBP9.36□□□□□ -0.91
GARNL3-218ENST00000487565 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
GARNL3-218ENST00000487565 NLGN2Q8NFZ4 835 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 FHDC1Q9C0D6 1143 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-218ENST00000487565 PIM2Q9P1W9 311 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 HRH3Q9Y5N1 445 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 DUOX1Q9NRD9 1551 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 CACNA1SQ13698 1873 aa9.36□□□□□ -0.91
GARNL3-218ENST00000487565 A0A1B0GUL7 405 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 TAF5LO75529 589 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 MX1P20591 662 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 TAF1P21675 1872 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 RGS3P49796 1198 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 GPSM2P81274 684 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 LTBP1Q14766 1721 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 EML3Q32P44 896 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 WDR44Q5JSH3 913 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 GNASQ5JWF2 1037 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 GORABQ5T7V8 394 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 DPP8Q6V1X1 898 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-218ENST00000487565 SLC51AQ86UW1 340 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 SP8Q8IXZ3 490 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 LPIN2Q92539 896 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 NEUROD6Q96NK8 337 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 TLR7Q9NYK1 1049 aaKnown RBP9.35□□□□□ -0.91
GARNL3-218ENST00000487565 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
GARNL3-218ENST00000487565 ZNF804BA4D1E1 1349 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 AOX1Q06278 1338 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 PHKA2P46019 1235 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 GDF10P55107 478 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 UBE4AQ14139 1066 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 TLR1Q15399 786 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 RNFT1Q5M7Z0 435 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 TRIM22Q8IYM9 498 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 OTUD7AQ8TE49 926 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-218ENST00000487565 EAF2Q96CJ1 260 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-218ENST00000487565 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 CCDC8Q9H0W5 538 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-218ENST00000487565 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 DBNLQ9UJU6 430 aaKnown RBP9.34□□□□□ -0.91
GARNL3-218ENST00000487565 NSFL1CQ9UNZ2 370 aaKnown RBP9.34□□□□□ -0.91
GARNL3-218ENST00000487565 LEMD3Q9Y2U8 911 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-218ENST00000487565 MED23Q9ULK4 1368 aa9.34□□□□□ -0.91
GARNL3-218ENST00000487565 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
GARNL3-218ENST00000487565 SNED1Q8TER0 1413 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms