RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 DDX60LQ5H9U9 1706 aaKnown RBP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 PHIPQ8WWQ0 1821 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 NAV1Q8NEY1 1877 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 DDTLA6NHG4 134 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 IDH1O75874 414 aaKnown RBP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 IREB2P48200 963 aaKnown RBP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 CTCFP49711 727 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 PRSS12P56730 875 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 GSTO1P78417 241 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 SLFNL1Q499Z3 407 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 EXOC6Q8TAG9 804 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 ZKSCAN4Q969J2 545 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 WNK4Q96J92 1243 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 WRNIP1Q96S55 665 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 DNAJC2Q99543 621 aaKnown RBP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 ELP3Q9H9T3 547 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 AATFQ9NY61 560 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 SUPT16HQ9Y5B9 1047 aaKnown RBP8.73□□□□□ -1.01
UBE4B-209ENST00000487244 SNCAIPQ9Y6H5 919 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 PTPRFP10586 1907 aa8.73□□□□□ -1.01
UBE4B-209ENST00000487244 BAZ2AQ9UIF9 1905 aaKnown RBP8.72□□□□□ -1.01
UBE4B-209ENST00000487244 FAM196BA6NMK8 535 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 GOLIM4O00461 696 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 ENTPD3O75355 529 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 TRPA1O75762 1119 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 CHGBP05060 677 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 LDHCP07864 332 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 CYP7A1P22680 504 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 INPP5BP32019 993 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 DYNLL1P63167 89 aaKnown RBP8.72□□□□□ -1.01
UBE4B-209ENST00000487244 IRX6P78412 446 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-209ENST00000487244 ANKRD13AQ8IZ07 590 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 MAGEB6Q8N7X4 407 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 MIGA1Q8NAN2 632 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 OTUD7AQ8TE49 926 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-209ENST00000487244 OPTNQ96CV9 577 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 SLC10A4Q96EP9 437 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 BEGAINQ9BUH8 593 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 BOLA2Q9H3K6 86 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 RNF186Q9NXI6 227 aa8.72□□□□□ -1.01
UBE4B-209ENST00000487244 PDE6AP16499 860 aa8.71□□□□□ -1.02
UBE4B-209ENST00000487244 ATP5JP18859 108 aa8.71□□□□□ -1.02
UBE4B-209ENST00000487244 ZSCAN29Q8IWY8 852 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-209ENST00000487244 TEX11Q8IYF3 940 aa8.71□□□□□ -1.02
UBE4B-209ENST00000487244 OSBPL5Q9H0X9 879 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-209ENST00000487244 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-209ENST00000487244 COL2A1P02458 1487 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-209ENST00000487244 TCRBV5S4A2TA0A5A2 114 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 PHF20L1A8MW92 1017 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 TULP1O00294 542 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-209ENST00000487244 IGF2BP3O00425 579 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE4B-209ENST00000487244 ZBTB48P10074 688 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-209ENST00000487244 PPP4CP60510 307 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 SLC4A8Q2Y0W8 1093 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 MAPKAPK5Q8IW41 473 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE4B-209ENST00000487244 TGFBRAP1Q8WUH2 860 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 KCTD12Q96CX2 325 aaKnown RBP8.7□□□□□ -1.02
UBE4B-209ENST00000487244 HAUS7Q99871 368 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 ZNF341Q9BYN7 854 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 R3HDMLQ9H3Y0 253 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 PRDM10Q9NQV6 1147 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 PAG1Q9NWQ8 432 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 ZNF112Q9UJU3 913 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 CSADQ9Y600 493 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 FLT1P17948 1338 aa8.7□□□□□ -1.02
UBE4B-209ENST00000487244 ZSWIM8A7E2V4 1837 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 UNCXA6NJT0 531 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 CA12O43570 354 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 TBC1D8O95759 1140 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 BAG3O95817 575 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 TM4SF4P48230 202 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 MAP3K12Q12852 859 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 HDAC1Q13547 482 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-209ENST00000487244 TTF1Q15361 905 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-209ENST00000487244 SLC9C2Q5TAH2 1124 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 CCDC84Q86UT8 332 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-209ENST00000487244 LAPTM4BQ86VI4 370 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 PTPN18Q99952 460 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 RIOK1Q9BRS2 568 aaKnown RBP8.69□□□□□ -1.02
UBE4B-209ENST00000487244 NOL10Q9BSC4 688 aaKnown RBP8.69□□□□□ -1.02
UBE4B-209ENST00000487244 NPDC1Q9NQX5 325 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-209ENST00000487244 ECHDC1Q9NTX5 307 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 SAGE1Q9NXZ1 904 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 SAP30BPQ9UHR5 308 aaKnown RBP8.69□□□□□ -1.02
UBE4B-209ENST00000487244 ZNF532Q9HCE3 1301 aa8.69□□□□□ -1.02
UBE4B-209ENST00000487244 MYH8P13535 1937 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 HTTP42858 3142 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 MANSC4A6NHS7 340 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-209ENST00000487244 IRF6O14896 467 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 MAP4K4O95819 1239 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-209ENST00000487244 IGHDP01880 384 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 MAP3K10Q02779 954 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 SREBF2Q12772 1141 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 RRP1BQ14684 758 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms