RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
LIMS3-205ENST00000487150 GJA5P36382 358 aa17.46■□□□□ 0.39
LIMS3-205ENST00000487150 CCL15Q16663 113 aa17.46■□□□□ 0.39
LIMS3-205ENST00000487150 ABCB5Q2M3G0 1257 aa17.46■□□□□ 0.39
LIMS3-205ENST00000487150 CASC1Q6TDU7 716 aa17.46■□□□□ 0.39
LIMS3-205ENST00000487150 FASTKD5Q7L8L6 764 aaKnown RBP17.46■□□□□ 0.39
LIMS3-205ENST00000487150 IFNL3Q8IZI9 196 aa17.46■□□□□ 0.39
LIMS3-205ENST00000487150 SEC62Q99442 399 aaKnown RBP17.46■□□□□ 0.39
LIMS3-205ENST00000487150 EPB41L4AQ9HCS5 686 aaPredicted RBP17.46■□□□□ 0.39
LIMS3-205ENST00000487150 AK9Q5TCS8 1911 aa17.46■□□□□ 0.39
LIMS3-205ENST00000487150 SHMT1P34896 483 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 PDE4BQ07343 736 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 ALX1Q15699 326 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 CWC27Q6UX04 472 aaKnown RBP17.45■□□□□ 0.38
LIMS3-205ENST00000487150 TMEM179Q6ZVK1 233 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 IFNL1Q8IU54 200 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 ZNF280CQ8ND82 737 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 MS4A4AQ96JQ5 239 aa17.45■□□□□ 0.38
LIMS3-205ENST00000487150 NT5C2P49902 561 aa17.44■□□□□ 0.38
LIMS3-205ENST00000487150 ZIC5Q96T25 663 aa17.44■□□□□ 0.38
LIMS3-205ENST00000487150 WDR18Q9BV38 432 aa17.44■□□□□ 0.38
LIMS3-205ENST00000487150 CFHR5Q9BXR6 569 aa17.44■□□□□ 0.38
LIMS3-205ENST00000487150 AFG3L2Q9Y4W6 797 aa17.44■□□□□ 0.38
LIMS3-205ENST00000487150 A0A0G2JLL6 359 aaPredicted RBP17.43■□□□□ 0.38
LIMS3-205ENST00000487150 MINDY4BA8MYZ0 360 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 GH2P01242 217 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 CYP2D6P10635 497 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 PCP11498 1178 aaKnown RBP17.43■□□□□ 0.38
LIMS3-205ENST00000487150 CDK8P49336 464 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 CCDC129Q6ZRS4 1044 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 PRRT2Q7Z6L0 340 aaPredicted RBP17.43■□□□□ 0.38
LIMS3-205ENST00000487150 BRI3BPQ8WY22 251 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 MKNK2Q9HBH9 465 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 RNF186Q9NXI6 227 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 CDK5RAP2Q96SN8 1893 aa17.43■□□□□ 0.38
LIMS3-205ENST00000487150 DOCK1Q14185 1865 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 TRIM75PA6NK02 468 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 C19orf81C9J6K1 198 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
LIMS3-205ENST00000487150 GDF11O95390 407 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 HSPD1P10809 573 aaKnown RBP17.42■□□□□ 0.38
LIMS3-205ENST00000487150 USP14P54578 494 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 PPARAQ07869 468 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 PABPC4Q13310 644 aaKnown RBP eCLIP17.42■□□□□ 0.38
LIMS3-205ENST00000487150 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
LIMS3-205ENST00000487150 ANKRD23Q86SG2 305 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 ZNF589Q86UQ0 364 aaPredicted RBP17.42■□□□□ 0.38
LIMS3-205ENST00000487150 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
LIMS3-205ENST00000487150 FEZ1Q99689 392 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 DSCC1Q9BVC3 393 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 TMOD4Q9NZQ9 345 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 SLC45A1Q9Y2W3 748 aa17.42■□□□□ 0.38
LIMS3-205ENST00000487150 MYH1P12882 1939 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 FOXN1O15353 648 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 TRPA1O75762 1119 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 CHMLP26374 656 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 SPP2Q13103 211 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 RAB3GAP1Q15042 981 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 RNF41Q9H4P4 317 aaPredicted RBP17.41■□□□□ 0.38
LIMS3-205ENST00000487150 PRDM10Q9NQV6 1147 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 ANAPC4Q9UJX5 808 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
LIMS3-205ENST00000487150 SIPA1L1O43166 1804 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 CYP2D7A0A087X1C5 515 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 IGF2BP3O00425 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
LIMS3-205ENST00000487150 BACE1P56817 501 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
LIMS3-205ENST00000487150 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
LIMS3-205ENST00000487150 SLC44A5Q8NCS7 719 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 DYNLL2Q96FJ2 89 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 PARK7Q99497 189 aaKnown RBP17.4■□□□□ 0.38
LIMS3-205ENST00000487150 ZFYVE28Q9HCC9 887 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
LIMS3-205ENST00000487150 PCNTO95613 3336 aa17.39■□□□□ 0.38
LIMS3-205ENST00000487150 LAMB1P07942 1786 aa17.39■□□□□ 0.37
LIMS3-205ENST00000487150 HSPA8P11142 646 aaKnown RBP17.39■□□□□ 0.37
LIMS3-205ENST00000487150 ICA1Q05084 483 aa17.39■□□□□ 0.37
LIMS3-205ENST00000487150 TAF1CQ15572 869 aaPredicted RBP17.39■□□□□ 0.37
LIMS3-205ENST00000487150 SH3D19Q5HYK7 790 aa17.39■□□□□ 0.37
LIMS3-205ENST00000487150 KIAA1683Q9H0B3 1180 aa17.39■□□□□ 0.37
LIMS3-205ENST00000487150 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
LIMS3-205ENST00000487150 AGTPBP1Q9UPW5 1226 aa17.39■□□□□ 0.37
LIMS3-205ENST00000487150 BTBD19C9JJ37 291 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 FOXP2O15409 715 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 FGAP02671 866 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 MTMR2Q13614 643 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 IMMTQ16891 758 aaKnown RBP17.38■□□□□ 0.37
LIMS3-205ENST00000487150 USP17L2Q6R6M4 530 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 GADL1Q6ZQY3 521 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 SYNPO2Q9UMS6 1093 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 PLIN4Q96Q06 1357 aa17.38■□□□□ 0.37
LIMS3-205ENST00000487150 ZNF213O14771 459 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms