RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SLC4A4Q9Y6R1 1079 aa21.29■■□□□ 1
COL6A1-204ENST00000486023 LAMB1P07942 1786 aa21.28■■□□□ 1
COL6A1-204ENST00000486023 MPHOSPH10O00566 681 aaKnown RBP21.28■■□□□ 1
COL6A1-204ENST00000486023 ZYXQ15942 572 aaKnown RBP21.28■■□□□ 1
COL6A1-204ENST00000486023 WDR18Q9BV38 432 aa21.28■■□□□ 1
COL6A1-204ENST00000486023 PUS7LQ9H0K6 701 aaKnown RBP21.28■■□□□ 1
COL6A1-204ENST00000486023 OSBPP22059 807 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 CTGFP29279 349 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 UBE3CQ15386 1083 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 ABCB5Q2M3G0 1257 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 TATDN1Q6P1N9 297 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 ANKRD13CQ8N6S4 541 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 PROCA1Q8NCQ7 364 aaPredicted RBP21.27■■□□□ 1
COL6A1-204ENST00000486023 TRIM47Q96LD4 638 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 EHD4Q9H223 541 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 CABP5Q9NP86 173 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 PNMA3Q9UL41 463 aa21.27■■□□□ 1
COL6A1-204ENST00000486023 ADGRA2Q96PE1 1338 aa21.27■□□□□ 0.99
COL6A1-204ENST00000486023 DOCK1Q14185 1865 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 USP17L10C9JJH3 530 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 SHMT1P34896 483 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 RGS19P49795 217 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 BACE1P56817 501 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 PABPC4Q13310 644 aaKnown RBP eCLIP21.26■□□□□ 0.99
COL6A1-204ENST00000486023 SLC9C1Q4G0N8 1177 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 DYNLL2Q96FJ2 89 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 DDRGK1Q96HY6 314 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 FEZ1Q99689 392 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 SLC45A1Q9Y2W3 748 aa21.26■□□□□ 0.99
COL6A1-204ENST00000486023 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
COL6A1-204ENST00000486023 CYP2D7A0A087X1C5 515 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 ERC2O15083 957 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 BCRP11274 1271 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 HOXD10P28358 340 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 AMOTL1Q8IY63 956 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 KBTBD3Q8NAB2 608 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 EXOC6Q8TAG9 804 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 SH3TC2Q8TF17 1288 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 GINM1Q9NU53 330 aa21.25■□□□□ 0.99
COL6A1-204ENST00000486023 FCGRTP55899 365 aa21.24■□□□□ 0.99
COL6A1-204ENST00000486023 IRX3P78415 501 aaPredicted RBP21.24■□□□□ 0.99
COL6A1-204ENST00000486023 SH3D19Q5HYK7 790 aa21.24■□□□□ 0.99
COL6A1-204ENST00000486023 STK11IPQ8N1F8 1099 aa21.24■□□□□ 0.99
COL6A1-204ENST00000486023 SLC44A5Q8NCS7 719 aa21.24■□□□□ 0.99
COL6A1-204ENST00000486023 RAET1EQ8TD07 263 aa21.24■□□□□ 0.99
COL6A1-204ENST00000486023 ASCC2Q9H1I8 757 aaPredicted RBP21.24■□□□□ 0.99
COL6A1-204ENST00000486023 ATP8A2Q9NTI2 1148 aa21.24■□□□□ 0.99
COL6A1-204ENST00000486023 C19orf81C9J6K1 198 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 USP17L12C9JPN9 530 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 USP17L21D6R901 530 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 SMIM22K7EJ46 135 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 RNF113AO15541 343 aaKnown RBP21.23■□□□□ 0.99
COL6A1-204ENST00000486023 GNRH1P01148 92 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 MX1P20591 662 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 NBPF11Q86T75 865 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 GCC1Q96CN9 775 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 TAOK2Q9UL54 1235 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 TTC41PQ6P2S7 1318 aa21.23■□□□□ 0.99
COL6A1-204ENST00000486023 SIPA1L1O43166 1804 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 SEPT2Q15019 361 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 USP17L2Q6R6M4 530 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 ACER1Q8TDN7 264 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 P2RX7Q99572 595 aaKnown RBP21.22■□□□□ 0.99
COL6A1-204ENST00000486023 FSD1Q9BTV5 496 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 EMILIN3Q9NT22 766 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 SRRDQ9UH36 339 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 MYPNQ86TC9 1320 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
COL6A1-204ENST00000486023 TNPO2O14787 897 aaKnown RBP21.21■□□□□ 0.99
COL6A1-204ENST00000486023 GLRX3O76003 335 aaKnown RBP21.21■□□□□ 0.99
COL6A1-204ENST00000486023 APPP05067 770 aa21.21■□□□□ 0.99
COL6A1-204ENST00000486023 PRKCZQ05513 592 aa21.21■□□□□ 0.99
COL6A1-204ENST00000486023 GABPAQ06546 454 aa21.21■□□□□ 0.99
COL6A1-204ENST00000486023 HDAC1Q13547 482 aaPredicted RBP21.21■□□□□ 0.99
COL6A1-204ENST00000486023 PI4K2BQ8TCG2 481 aa21.21■□□□□ 0.99
COL6A1-204ENST00000486023 OSBP2Q969R2 916 aa21.21■□□□□ 0.99
COL6A1-204ENST00000486023 STRBPQ96SI9 672 aaKnown RBP21.21■□□□□ 0.99
COL6A1-204ENST00000486023 TMEM106CQ9BVX2 250 aa21.21■□□□□ 0.99
COL6A1-204ENST00000486023 RWDD1Q9H446 243 aaPredicted RBP21.21■□□□□ 0.99
COL6A1-204ENST00000486023 BIN2Q9UBW5 565 aaPredicted RBP21.21■□□□□ 0.99
COL6A1-204ENST00000486023 MYH1P12882 1939 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 POTEFA5A3E0 1075 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 PEX10O60683 326 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 IRX6P78412 446 aaPredicted RBP21.2■□□□□ 0.98
COL6A1-204ENST00000486023 C12orf60Q5U649 245 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 APPBP2Q92624 585 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 ARMC5Q96C12 935 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 GABRQQ9UN88 632 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 FOCADQ5VW36 1801 aa21.2■□□□□ 0.98
COL6A1-204ENST00000486023 MINDY4BA8MYZ0 360 aa21.19■□□□□ 0.98
COL6A1-204ENST00000486023 M0R2C6 588 aa21.19■□□□□ 0.98
COL6A1-204ENST00000486023 ZFYP08048 801 aaPredicted RBP21.19■□□□□ 0.98
COL6A1-204ENST00000486023 GCLCP48506 637 aaPredicted RBP21.19■□□□□ 0.98
COL6A1-204ENST00000486023 PRMT2P55345 433 aa21.19■□□□□ 0.98
COL6A1-204ENST00000486023 LRRFIP1Q32MZ4 808 aaKnown RBP21.19■□□□□ 0.98
COL6A1-204ENST00000486023 CTR9Q6PD62 1173 aa21.19■□□□□ 0.98
COL6A1-204ENST00000486023 SEC62Q99442 399 aaKnown RBP21.19■□□□□ 0.98
COL6A1-204ENST00000486023 LNPKQ9C0E8 428 aa21.19■□□□□ 0.98
COL6A1-204ENST00000486023 SWAP70Q9UH65 585 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms