RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 NOL9Q5SY16 702 aaKnown RBP9.4□□□□□ -0.9
MACF1-220ENST00000485063 SCYL3Q8IZE3 742 aa9.4□□□□□ -0.9
MACF1-220ENST00000485063 LCORLQ8N3X6 602 aa9.4□□□□□ -0.9
MACF1-220ENST00000485063 APPBP2Q92624 585 aa9.4□□□□□ -0.9
MACF1-220ENST00000485063 ZIC5Q96T25 663 aa9.4□□□□□ -0.9
MACF1-220ENST00000485063 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
MACF1-220ENST00000485063 ARMT1Q9H993 441 aa9.4□□□□□ -0.9
MACF1-220ENST00000485063 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.9
MACF1-220ENST00000485063 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
MACF1-220ENST00000485063 SNCAIPQ9Y6H5 919 aa9.4□□□□□ -0.9
MACF1-220ENST00000485063 MYH8P13535 1937 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 TRPA1O75762 1119 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 GNAT2P19087 354 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 PPIL2Q13356 520 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 SNAPC2Q13487 334 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 TICAM2Q86XR7 235 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 SDR42E1Q8WUS8 393 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 RILPL2Q969X0 211 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 TBC1D2Q9BYX2 928 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 OSBPL3Q9H4L5 887 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 MCM9Q9NXL9 1143 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 SLC4A4Q9Y6R1 1079 aa9.39□□□□□ -0.91
MACF1-220ENST00000485063 BAZ2AQ9UIF9 1905 aaKnown RBP9.39□□□□□ -0.91
MACF1-220ENST00000485063 SIPA1L1O43166 1804 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 CCL15-CCL14A0A0B4J2E2 113 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 FAM196BA6NMK8 535 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 CETPP11597 493 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 CAP2P40123 477 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 LBX1P52954 281 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 CCL15Q16663 113 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 SLC4A8Q2Y0W8 1093 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 PLEKHM2Q8IWE5 1019 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 PUS7LQ9H0K6 701 aaKnown RBP9.38□□□□□ -0.91
MACF1-220ENST00000485063 EHD4Q9H223 541 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 AS3MTQ9HBK9 375 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 DCP1AQ9NPI6 582 aaPredicted RBP9.38□□□□□ -0.91
MACF1-220ENST00000485063 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 GINM1Q9NU53 330 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 SERPINB13Q9UIV8 391 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
MACF1-220ENST00000485063 TESPA1A2RU30 521 aaPredicted RBP9.37□□□□□ -0.91
MACF1-220ENST00000485063 IRF6O14896 467 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 GPAA1O43292 621 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 APPP05067 770 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 ASNSP08243 561 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
MACF1-220ENST00000485063 PTPRAP18433 802 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 GJA5P36382 358 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 NACAP1Q9BZK3 213 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 CABP5Q9NP86 173 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 ARPP21Q9UBL0 812 aaPredicted RBP9.37□□□□□ -0.91
MACF1-220ENST00000485063 SWAP70Q9UH65 585 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 TSKSQ9UJT2 592 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 ZHX2Q9Y6X8 837 aa9.37□□□□□ -0.91
MACF1-220ENST00000485063 DDX60LQ5H9U9 1706 aaKnown RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 USP17L5A8MUK1 530 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 PATL2C9JE40 543 aaKnown RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 HIP1O00291 1037 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 CXCL11O14625 94 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 PRKAB2O43741 272 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 TDO2P48775 406 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 PLCD1P51178 756 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 MFAP1P55081 439 aaKnown RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 CERKLQ49MI3 558 aaPredicted RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 ZMYM1Q5SVZ6 1142 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 CENPQQ7L2Z9 268 aaPredicted RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 FASTKD5Q7L8L6 764 aaKnown RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 METTL16Q86W50 562 aaKnown RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 OSBP2Q969R2 916 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 MS4A4AQ96JQ5 239 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 STRBPQ96SI9 672 aaKnown RBP9.36□□□□□ -0.91
MACF1-220ENST00000485063 HELLSQ9NRZ9 838 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
MACF1-220ENST00000485063 PHIPQ8WWQ0 1821 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 USP17L21D6R901 530 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 M0R2C6 588 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 TBC1D8O95759 1140 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 CHGBP05060 677 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 ABCB5Q2M3G0 1257 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 TATDN1Q6P1N9 297 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 ZNF280CQ8ND82 737 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 CFHR5Q9BXR6 569 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 ZNF287Q9HBT7 754 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 ZCCHC17Q9NP64 241 aaKnown RBP9.35□□□□□ -0.91
MACF1-220ENST00000485063 KCNH4Q9UQ05 1017 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 AFG3L2Q9Y4W6 797 aa9.35□□□□□ -0.91
MACF1-220ENST00000485063 TRIM75PA6NK02 468 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 GSG1L2A8MUP6 293 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 MINDY4BA8MYZ0 360 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
MACF1-220ENST00000485063 MPHOSPH10O00566 681 aaKnown RBP9.34□□□□□ -0.91
MACF1-220ENST00000485063 GDF11O95390 407 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms