RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 DEFB123Q8N688 67 aa14.16□□□□□ -0.14
COL13A1-209ENST00000484990 SH3RF3Q8TEJ3 882 aaPredicted RBP14.16□□□□□ -0.14
COL13A1-209ENST00000484990 TRIB2Q92519 343 aa14.16□□□□□ -0.14
COL13A1-209ENST00000484990 AATFQ9NY61 560 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL13A1-209ENST00000484990 LOC285556D6RIA3 1793 aa14.15□□□□□ -0.14
COL13A1-209ENST00000484990 GNAI2P04899 355 aa14.15□□□□□ -0.14
COL13A1-209ENST00000484990 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
COL13A1-209ENST00000484990 MCAMP43121 646 aa14.15□□□□□ -0.14
COL13A1-209ENST00000484990 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
COL13A1-209ENST00000484990 RARSP54136 660 aaKnown RBP14.15□□□□□ -0.14
COL13A1-209ENST00000484990 PPP4CP60510 307 aa14.15□□□□□ -0.14
COL13A1-209ENST00000484990 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
COL13A1-209ENST00000484990 TGFBRAP1Q8WUH2 860 aa14.15□□□□□ -0.14
COL13A1-209ENST00000484990 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
COL13A1-209ENST00000484990 CWC22Q9HCG8 908 aaKnown RBP14.15□□□□□ -0.14
COL13A1-209ENST00000484990 HLA-DOAP06340 250 aa14.14□□□□□ -0.15
COL13A1-209ENST00000484990 ZKSCAN1P17029 563 aaPredicted RBP14.14□□□□□ -0.15
COL13A1-209ENST00000484990 RGS2P41220 211 aa14.14□□□□□ -0.15
COL13A1-209ENST00000484990 MAGEA10P43363 369 aaPredicted RBP14.14□□□□□ -0.15
COL13A1-209ENST00000484990 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
COL13A1-209ENST00000484990 ERVK-24P63145 666 aa14.14□□□□□ -0.15
COL13A1-209ENST00000484990 CACNB2Q08289 660 aaPredicted RBP14.14□□□□□ -0.15
COL13A1-209ENST00000484990 TTC39AQ5SRH9 613 aa14.14□□□□□ -0.15
COL13A1-209ENST00000484990 PLEKHH3Q7Z736 793 aa14.14□□□□□ -0.15
COL13A1-209ENST00000484990 METTL16Q86W50 562 aaKnown RBP14.14□□□□□ -0.15
COL13A1-209ENST00000484990 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
COL13A1-209ENST00000484990 GLRX3O76003 335 aaKnown RBP14.13□□□□□ -0.15
COL13A1-209ENST00000484990 Q3C1V9 767 aa14.13□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
COL13A1-209ENST00000484990 GPR142Q7Z601 462 aa14.13□□□□□ -0.15
COL13A1-209ENST00000484990 MAPKAPK5Q8IW41 473 aa14.13□□□□□ -0.15
COL13A1-209ENST00000484990 TXNRD2Q9NNW7 524 aa14.13□□□□□ -0.15
COL13A1-209ENST00000484990 GPR108Q9NPR9 543 aa14.13□□□□□ -0.15
COL13A1-209ENST00000484990 PALD1Q9ULE6 856 aa14.13□□□□□ -0.15
COL13A1-209ENST00000484990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.13□□□□□ -0.15
COL13A1-209ENST00000484990 CCNA1P78396 465 aa14.12□□□□□ -0.15
COL13A1-209ENST00000484990 USP6NLQ92738 828 aa14.12□□□□□ -0.15
COL13A1-209ENST00000484990 PAGR1Q9BTK6 254 aa14.12□□□□□ -0.15
COL13A1-209ENST00000484990 SNRKQ9NRH2 765 aa14.12□□□□□ -0.15
COL13A1-209ENST00000484990 STXBP5LQ9Y2K9 1186 aa14.12□□□□□ -0.15
COL13A1-209ENST00000484990 RABGAP1Q9Y3P9 1069 aa14.12□□□□□ -0.15
COL13A1-209ENST00000484990 A0A0C4DFX4 3053 aa14.12□□□□□ -0.15
COL13A1-209ENST00000484990 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 COL6A3P12111 3177 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 GDF11O95390 407 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 COL6A1P12109 1028 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 OS9Q13438 667 aaPredicted RBP14.11□□□□□ -0.15
COL13A1-209ENST00000484990 DDX60LQ5H9U9 1706 aaKnown RBP14.11□□□□□ -0.15
COL13A1-209ENST00000484990 MORN1Q5T089 497 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 CERS3Q8IU89 383 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 EDC3Q96F86 508 aaKnown RBP14.11□□□□□ -0.15
COL13A1-209ENST00000484990 ZBTB21Q9ULJ3 1066 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 PFASO15067 1338 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 FLT1P17948 1338 aa14.11□□□□□ -0.15
COL13A1-209ENST00000484990 PNMA6EA0A0J9YXQ4 647 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L15C9J2P7 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L13C9JLJ4 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L11C9JVI0 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L18D6R9N7 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L22D6RA61 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L17D6RBQ6 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L19D6RCP7 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L20D6RJB6 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 PEX10O60683 326 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP14P54578 494 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 JAG1P78504 1218 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 USP17L24Q0WX57 530 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 TNNI3KQ59H18 835 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 MFSD14CQ5VZR4 134 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 LHX8Q68G74 356 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 Q7L0L9 218 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 ZNF512BQ96KM6 892 aaPredicted RBP14.1□□□□□ -0.15
COL13A1-209ENST00000484990 APBA2Q99767 749 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 PORCNQ9H237 461 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 DNAJC18Q9H819 358 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 EMILIN3Q9NT22 766 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 MTMR10Q9NXD2 777 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 FPGT-TNNI3KV9GXZ4 949 aa14.1□□□□□ -0.15
COL13A1-209ENST00000484990 LAMA3Q16787 3333 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 MSCO60682 206 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
COL13A1-209ENST00000484990 CCND3P30281 292 aaPredicted RBP14.09□□□□□ -0.15
COL13A1-209ENST00000484990 MAP2K5Q13163 448 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 CCL14Q16627 93 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 FRAT1Q92837 279 aaPredicted RBP14.09□□□□□ -0.15
COL13A1-209ENST00000484990 FEZ1Q99689 392 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 CABP5Q9NP86 173 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 IVNS1ABPQ9Y6Y0 642 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 CUL9Q8IWT3 2517 aa14.09□□□□□ -0.15
COL13A1-209ENST00000484990 SLC15A5A6NIM6 579 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 GH2P01242 217 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 TRIM27P14373 513 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 CYP7A1P22680 504 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 USP5P45974 858 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 MDM2Q00987 491 aaPredicted RBP14.08□□□□□ -0.16
COL13A1-209ENST00000484990 ATP2B2Q01814 1243 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 LRRC26Q2I0M4 334 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 WDR78Q5VTH9 848 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 CATSPERGQ6ZRH7 1159 aa14.08□□□□□ -0.16
COL13A1-209ENST00000484990 ADGRA1Q86SQ6 560 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms