RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 ERVK-9P63128 1117 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 ERVK-24P63145 666 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 PDE3AQ14432 1141 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 LRRC26Q2I0M4 334 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 Q3C1V9 767 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 TBC1D9Q6ZT07 1266 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 FOXP4Q8IVH2 680 aaPredicted RBP15.34■□□□□ 0.05
PABPC4-215ENST00000484555 NEUROD6Q96NK8 337 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 MEIS3Q99687 375 aa15.34■□□□□ 0.05
PABPC4-215ENST00000484555 API5Q9BZZ5 524 aaKnown RBP15.34■□□□□ 0.05
PABPC4-215ENST00000484555 NOB1Q9ULX3 412 aaKnown RBP15.34■□□□□ 0.05
PABPC4-215ENST00000484555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
PABPC4-215ENST00000484555 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 CT47B1P0C2W7 299 aaPredicted RBP15.33■□□□□ 0.04
PABPC4-215ENST00000484555 RGS2P41220 211 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 PPP4CP60510 307 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 JAG1P78504 1218 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 PI16Q6UXB8 463 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 GPR142Q7Z601 462 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 TRMT2AQ8IZ69 625 aaKnown RBP15.33■□□□□ 0.04
PABPC4-215ENST00000484555 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
PABPC4-215ENST00000484555 COL25A1Q9BXS0 654 aaPredicted RBP15.33■□□□□ 0.04
PABPC4-215ENST00000484555 DNAJC18Q9H819 358 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 RAI14Q9P0K7 980 aa15.33■□□□□ 0.04
PABPC4-215ENST00000484555 SRGAP3O43295 1099 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 PEX10O60683 326 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 PLCG2P16885 1265 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 CCND3P30281 292 aaPredicted RBP15.32■□□□□ 0.04
PABPC4-215ENST00000484555 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 PLEKHH3Q7Z736 793 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 APBA2Q99767 749 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 PORCNQ9H237 461 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 CUL9Q8IWT3 2517 aa15.32■□□□□ 0.04
PABPC4-215ENST00000484555 IGSF3O75054 1194 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 BAG3O95817 575 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 GNAI3P08754 354 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 UQCRFS1P1P0C7P4 283 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 MCAMP43121 646 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 MDM2Q00987 491 aaPredicted RBP15.31■□□□□ 0.04
PABPC4-215ENST00000484555 CCL14Q16627 93 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 GORABQ5T7V8 394 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.31■□□□□ 0.04
PABPC4-215ENST00000484555 NOL10Q9BSC4 688 aaKnown RBP15.31■□□□□ 0.04
PABPC4-215ENST00000484555 LRP2BPQ9P2M1 347 aa15.31■□□□□ 0.04
PABPC4-215ENST00000484555 MAP2K5Q13163 448 aa15.3■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
PABPC4-215ENST00000484555 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
PABPC4-215ENST00000484555 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
PABPC4-215ENST00000484555 GUCD1Q96NT3 240 aa15.3■□□□□ 0.04
PABPC4-215ENST00000484555 EMILIN3Q9NT22 766 aa15.3■□□□□ 0.04
PABPC4-215ENST00000484555 ZBTB21Q9ULJ3 1066 aa15.3■□□□□ 0.04
PABPC4-215ENST00000484555 RABGAP1Q9Y3P9 1069 aa15.3■□□□□ 0.04
PABPC4-215ENST00000484555 FLT1P17948 1338 aa15.29■□□□□ 0.04
PABPC4-215ENST00000484555 NAA16Q6N069 864 aaPredicted RBP15.29■□□□□ 0.04
PABPC4-215ENST00000484555 TGFBRAP1Q8WUH2 860 aa15.29■□□□□ 0.04
PABPC4-215ENST00000484555 ARHGAP45Q92619 1136 aa15.29■□□□□ 0.04
PABPC4-215ENST00000484555 CDCA7LQ96GN5 454 aa15.29■□□□□ 0.04
PABPC4-215ENST00000484555 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
PABPC4-215ENST00000484555 AATFQ9NY61 560 aaKnown RBP eCLIP15.29■□□□□ 0.04
PABPC4-215ENST00000484555 FRMPD3Q5JV73 1810 aa15.29■□□□□ 0.04
PABPC4-215ENST00000484555 FOCADQ5VW36 1801 aa15.29■□□□□ 0.04
PABPC4-215ENST00000484555 MSCO60682 206 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 GLRX3O76003 335 aaKnown RBP15.28■□□□□ 0.04
PABPC4-215ENST00000484555 HOXC6P09630 235 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 CCNA1P78396 465 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 SHROOM1Q2M3G4 852 aaPredicted RBP15.28■□□□□ 0.04
PABPC4-215ENST00000484555 MFSD14CQ5VZR4 134 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 MAPKAPK5Q8IW41 473 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 CRACR2BQ8N4Y2 399 aaPredicted RBP15.28■□□□□ 0.04
PABPC4-215ENST00000484555 LPAR1Q92633 364 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 LBHD1Q9BQE6 289 aaPredicted RBP15.28■□□□□ 0.04
PABPC4-215ENST00000484555 PAGR1Q9BTK6 254 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 EYSQ5T1H1 3165 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 MAST2Q6P0Q8 1798 aa15.28■□□□□ 0.04
PABPC4-215ENST00000484555 SLC15A5A6NIM6 579 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L15C9J2P7 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L13C9JLJ4 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L11C9JVI0 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L18D6R9N7 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L22D6RA61 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L19D6RCP7 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L20D6RJB6 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 CNMDO75829 334 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 GDF11O95390 407 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 IGHA2P01877 340 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 PTPREP23469 700 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 USP17L24Q0WX57 530 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 ATF7IPQ6VMQ6 1270 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 SENP6Q9GZR1 1112 aaPredicted RBP15.27■□□□□ 0.04
PABPC4-215ENST00000484555 GPR108Q9NPR9 543 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 DDX20Q9UHI6 824 aaKnown RBP15.27■□□□□ 0.04
PABPC4-215ENST00000484555 PALD1Q9ULE6 856 aa15.27■□□□□ 0.04
PABPC4-215ENST00000484555 DNM1LO00429 736 aa15.26■□□□□ 0.03
PABPC4-215ENST00000484555 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.034e-7■□□□□ 10.4
PABPC4-215ENST00000484555 TATDN1Q6P1N9 297 aa15.26■□□□□ 0.03
PABPC4-215ENST00000484555 CATSPERGQ6ZRH7 1159 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms