RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ALDH1A1P00352 501 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 CLDN10P78369 228 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 PTPN12Q05209 780 aaKnown RBP7.45□□□□□ -1.22
CSDE1-207ENST00000483407 CHRNDQ07001 517 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 PRKG1Q13976 671 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 DLGAP5Q15398 846 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 G2E3Q7L622 706 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 TXNRD3Q86VQ6 643 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 ANKMY2Q8IV38 441 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 LINS1Q8NG48 757 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 FAM200AQ8TCP9 573 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 DNAAF4Q8WXU2 420 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 CD209Q9NNX6 404 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 ANGEL1Q9UNK9 670 aaKnown RBP7.45□□□□□ -1.22
CSDE1-207ENST00000483407 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 GNEQ9Y223 722 aaKnown RBP7.45□□□□□ -1.22
CSDE1-207ENST00000483407 NOD1Q9Y239 953 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 IL16Q14005 1332 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 SCN9AQ15858 1988 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 MANSC4A6NHS7 340 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-207ENST00000483407 ESPNB1AK53 854 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 FKTNO75072 461 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 CSF1RP07333 972 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 KLRK1P26718 216 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 INHBEP58166 350 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 KCNC4Q03721 635 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 IFIT5Q13325 482 aaKnown RBP7.44□□□□□ -1.22
CSDE1-207ENST00000483407 NBPF20Q3BBV1 942 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 PHLDB3Q6NSJ2 640 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 FBXO46Q6PJ61 603 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-207ENST00000483407 ZNF804AQ7Z570 1209 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 ZNF775Q96BV0 537 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-207ENST00000483407 SLC10A4Q96EP9 437 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 CDV3Q9UKY7 258 aaKnown RBP7.44□□□□□ -1.22
CSDE1-207ENST00000483407 CHMP3Q9Y3E7 222 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 PPP2R3BQ9Y5P8 575 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 IVNS1ABPQ9Y6Y0 642 aa7.44□□□□□ -1.22
CSDE1-207ENST00000483407 COL1A1P02452 1464 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 ZBTB7BO15156 539 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 DKK1O94907 266 aa7.43□□□□□ -1.22
CSDE1-207ENST00000483407 MFAP1P55081 439 aaKnown RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 CASP7P55210 303 aa7.43□□□□□ -1.22
CSDE1-207ENST00000483407 FKBP1AP62942 108 aaKnown RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 SUPT20HL1Q3ZLR7 823 aa7.43□□□□□ -1.22
CSDE1-207ENST00000483407 TAF7LQ5H9L4 462 aa7.43□□□□□ -1.22
CSDE1-207ENST00000483407 LDLRAD1Q5T700 205 aa7.43□□□□□ -1.22
CSDE1-207ENST00000483407 SPRYD7Q5W111 196 aa7.43□□□□□ -1.22
CSDE1-207ENST00000483407 C15orf52Q6ZUT6 534 aaKnown RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 SIX5Q8N196 739 aa7.43□□□□□ -1.22
CSDE1-207ENST00000483407 CLP1Q92989 425 aaKnown RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 ZBED3Q96IU2 234 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 DNAAF2Q9NVR5 837 aaKnown RBP7.43□□□□□ -1.22
CSDE1-207ENST00000483407 UNCXA6NJT0 531 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 RNF223E7ERA6 249 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 F8W031 263 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-207ENST00000483407 ZBTB24O43167 697 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-207ENST00000483407 TAF5LO75529 589 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 ZBTB48P10074 688 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-207ENST00000483407 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
CSDE1-207ENST00000483407 DPYDQ12882 1025 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 MAP3K11Q16584 847 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 SWI5Q1ZZU3 235 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 CCDC57Q2TAC2 916 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 CFAP100Q494V2 611 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 OTUD7BQ6GQQ9 843 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 ANKLE1Q8NAG6 615 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 RGS22Q8NE09 1264 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 VEZTQ9HBM0 779 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 FANCIQ9NVI1 1328 aa7.42□□□□□ -1.22
CSDE1-207ENST00000483407 POLR2AP24928 1970 aaKnown RBP7.42□□□□□ -1.22
CSDE1-207ENST00000483407 CLRN2A0PK11 232 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 SNAP23O00161 211 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 IL1R1P14778 569 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 RBM5P52756 815 aaKnown RBP eCLIP7.41□□□□□ -1.22
CSDE1-207ENST00000483407 TRIM32Q13049 653 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 USP4Q13107 963 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 TNFAIP1Q13829 316 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 OXLD1Q5BKU9 147 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 LMBR1LQ6UX01 489 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 LDHAL6AQ6ZMR3 332 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 WDR63Q8IWG1 891 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 CERS5Q8N5B7 392 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 WNK4Q96J92 1243 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 CNNM1Q9NRU3 951 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 KIAA1024Q9UPX6 916 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 TRIM17Q9Y577 477 aa7.41□□□□□ -1.22
CSDE1-207ENST00000483407 AKAP11Q9UKA4 1901 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 F6X3S4 739 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 GRM8O00222 908 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 PLIN1O60240 522 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 VAMP4O75379 141 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 VARSP26640 1264 aaKnown RBP7.4□□□□□ -1.22
CSDE1-207ENST00000483407 GGCXP38435 758 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 WNT7BP56706 349 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 FOXO4P98177 505 aa7.4□□□□□ -1.22
CSDE1-207ENST00000483407 EXOSC9Q06265 439 aaKnown RBP7.4□□□□□ -1.22
CSDE1-207ENST00000483407 RASA3Q14644 834 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms