RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TCRBV5S4A2TA0A5A2 114 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 IGSF3O75054 1194 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 SLC34A2O95436 690 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 GH2P01242 217 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 ASNSP08243 561 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 EN2P19622 333 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-212ENST00000482251 FCGRTP55899 365 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
CPSF4-212ENST00000482251 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
CPSF4-212ENST00000482251 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 ARMT1Q9H993 441 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 SLC45A1Q9Y2W3 748 aa12.69□□□□□ -0.38
CPSF4-212ENST00000482251 PEX10O60683 326 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 MBD4O95243 580 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-212ENST00000482251 ATP5JP18859 108 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 PLCD1P51178 756 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 RRP1P56182 461 aaKnown RBP12.68□□□□□ -0.38
CPSF4-212ENST00000482251 NBPF11Q86T75 865 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
CPSF4-212ENST00000482251 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-212ENST00000482251 HAUS7Q99871 368 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
CPSF4-212ENST00000482251 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
CPSF4-212ENST00000482251 TMOD4Q9NZQ9 345 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 GABRQQ9UN88 632 aa12.68□□□□□ -0.38
CPSF4-212ENST00000482251 TNPO2O14787 897 aaKnown RBP12.67□□□□□ -0.38
CPSF4-212ENST00000482251 PRKAB2O43741 272 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 GNRH1P01148 92 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 CYP2D6P10635 497 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 HOXD10P28358 340 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 ADD2P35612 726 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 BACE1P56817 501 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 IRX3P78415 501 aaPredicted RBP12.67□□□□□ -0.38
CPSF4-212ENST00000482251 RAB3GAP1Q15042 981 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 MTFR1Q15390 333 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 FEZ1Q99689 392 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 MCM9Q9NXL9 1143 aa12.67□□□□□ -0.38
CPSF4-212ENST00000482251 KIAA0100Q14667 2235 aaKnown RBP12.67□□□□□ -0.38
CPSF4-212ENST00000482251 BAZ2AQ9UIF9 1905 aaKnown RBP12.66□□□□□ -0.38
CPSF4-212ENST00000482251 GRK4P32298 578 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 SHMT1P34896 483 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 PRMT2P55345 433 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 SH3D19Q5HYK7 790 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 TTC6Q86TZ1 520 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 SLC44A5Q8NCS7 719 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.66□□□□□ -0.38
CPSF4-212ENST00000482251 EHD4Q9H223 541 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-212ENST00000482251 BIN2Q9UBW5 565 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-212ENST00000482251 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
CPSF4-212ENST00000482251 USP17L10C9JJH3 530 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 MPHOSPH10O00566 681 aaKnown RBP12.65□□□□□ -0.38
CPSF4-212ENST00000482251 ELNP15502 786 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 FLT3LGP49771 235 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 PABPC4Q13310 644 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPSF4-212ENST00000482251 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 ABCB5Q2M3G0 1257 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 CERKLQ49MI3 558 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-212ENST00000482251 TATDN1Q6P1N9 297 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 TMED8Q6PL24 325 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-212ENST00000482251 CRBNQ96SW2 442 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
CPSF4-212ENST00000482251 MYH8P13535 1937 aa12.64□□□□□ -0.39
CPSF4-212ENST00000482251 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
CPSF4-212ENST00000482251 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
CPSF4-212ENST00000482251 ACER1Q8TDN7 264 aa12.64□□□□□ -0.39
CPSF4-212ENST00000482251 DYNLL2Q96FJ2 89 aa12.64□□□□□ -0.39
CPSF4-212ENST00000482251 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
CPSF4-212ENST00000482251 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
CPSF4-212ENST00000482251 ADCY3O60266 1144 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 GCLCP48506 637 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-212ENST00000482251 GABPAQ06546 454 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 SEPT2Q15019 361 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 OTUD7AQ8TE49 926 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-212ENST00000482251 COA7Q96BR5 231 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 GPATCH3Q96I76 525 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 P2RX7Q99572 595 aaKnown RBP12.63□□□□□ -0.39
CPSF4-212ENST00000482251 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 PUS7LQ9H0K6 701 aaKnown RBP12.63□□□□□ -0.39
CPSF4-212ENST00000482251 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 CABP5Q9NP86 173 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 SLC4A4Q9Y6R1 1079 aa12.63□□□□□ -0.39
CPSF4-212ENST00000482251 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 INHAP05111 366 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 CCL5P13501 91 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 GUCY1A2P33402 732 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 HERVK_113P62684 666 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 UBE3CQ15386 1083 aa12.62□□□□□ -0.39
CPSF4-212ENST00000482251 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
CPSF4-212ENST00000482251 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms