RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 WDR78Q5VTH9 848 aa13.95□□□□□ -0.18
CCDC18-208ENST00000479653 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
CCDC18-208ENST00000479653 ARRDC4Q8NCT1 418 aa13.95□□□□□ -0.18
CCDC18-208ENST00000479653 LPIN2Q92539 896 aa13.95□□□□□ -0.18
CCDC18-208ENST00000479653 TRIM43Q96BQ3 446 aaPredicted RBP13.95□□□□□ -0.18
CCDC18-208ENST00000479653 SRCIN1Q9C0H9 1055 aa13.95□□□□□ -0.18
CCDC18-208ENST00000479653 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
CCDC18-208ENST00000479653 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.94□□□□□ -0.18
CCDC18-208ENST00000479653 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.94□□□□□ -0.18
CCDC18-208ENST00000479653 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
CCDC18-208ENST00000479653 ALDH1L1O75891 902 aa13.94□□□□□ -0.18
CCDC18-208ENST00000479653 CAP2P40123 477 aa13.94□□□□□ -0.18
CCDC18-208ENST00000479653 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
CCDC18-208ENST00000479653 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
CCDC18-208ENST00000479653 DZIP1Q86YF9 867 aaKnown RBP13.94□□□□□ -0.18
CCDC18-208ENST00000479653 TIFAQ96CG3 184 aa13.94□□□□□ -0.18
CCDC18-208ENST00000479653 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
CCDC18-208ENST00000479653 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
CCDC18-208ENST00000479653 VAMP4O75379 141 aa13.93□□□□□ -0.18
CCDC18-208ENST00000479653 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
CCDC18-208ENST00000479653 HOXA7P31268 230 aaPredicted RBP13.93□□□□□ -0.18
CCDC18-208ENST00000479653 CYP2C19P33261 490 aa13.93□□□□□ -0.18
CCDC18-208ENST00000479653 BTDP43251 543 aa13.93□□□□□ -0.18
CCDC18-208ENST00000479653 EPHB4P54760 987 aa13.93□□□□□ -0.18
CCDC18-208ENST00000479653 BACE1P56817 501 aa13.93□□□□□ -0.18
CCDC18-208ENST00000479653 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
CCDC18-208ENST00000479653 NECAB3Q96P71 396 aaPredicted RBP13.93□□□□□ -0.18
CCDC18-208ENST00000479653 UTYO14607 1347 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 SYNGAP1Q96PV0 1343 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 IGFBP4P22692 258 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 ADCYAP1R1P41586 468 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 RRP1BQ14684 758 aaKnown RBP13.92□□□□□ -0.18
CCDC18-208ENST00000479653 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 PRDM12Q9H4Q4 367 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 ABCF2Q9UG63 623 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 DENND2AQ9ULE3 1009 aa13.92□□□□□ -0.18
CCDC18-208ENST00000479653 GAKO14976 1311 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 NCOR1O75376 2440 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 RAG1P15918 1043 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 ITGB8P26012 769 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 TLE2Q04725 743 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
CCDC18-208ENST00000479653 RABL6Q3YEC7 729 aaPredicted RBP13.91□□□□□ -0.18
CCDC18-208ENST00000479653 AKNAD1Q5T1N1 836 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 CCDC129Q6ZRS4 1044 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 ANKRD44Q8N8A2 993 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 ARIH1Q9Y4X5 557 aaPredicted RBP13.91□□□□□ -0.18
CCDC18-208ENST00000479653 TACC3Q9Y6A5 838 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 PLXNB2O15031 1838 aa13.91□□□□□ -0.18
CCDC18-208ENST00000479653 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
CCDC18-208ENST00000479653 FPGSQ05932 587 aa13.9□□□□□ -0.18
CCDC18-208ENST00000479653 WWC1Q8IX03 1113 aa13.9□□□□□ -0.18
CCDC18-208ENST00000479653 ZGPATQ8N5A5 531 aaKnown RBP13.9□□□□□ -0.18
CCDC18-208ENST00000479653 TRPV1Q8NER1 839 aa13.9□□□□□ -0.18
CCDC18-208ENST00000479653 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
CCDC18-208ENST00000479653 LRFN3Q9BTN0 628 aa13.9□□□□□ -0.18
CCDC18-208ENST00000479653 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
CCDC18-208ENST00000479653 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
CCDC18-208ENST00000479653 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 C19orf81C9J6K1 198 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 USP17L10C9JJH3 530 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 EYA2O00167 538 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 PTPREP23469 700 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 CCNA1P78396 465 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 SNX17Q15036 470 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 ALYREFQ86V81 257 aaKnown RBP13.89□□□□□ -0.19
CCDC18-208ENST00000479653 FAM163AQ96GL9 167 aaPredicted RBP13.89□□□□□ -0.19
CCDC18-208ENST00000479653 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
CCDC18-208ENST00000479653 IVNS1ABPQ9Y6Y0 642 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 PTPRFP10586 1907 aa13.89□□□□□ -0.19
CCDC18-208ENST00000479653 PHIPQ8WWQ0 1821 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 PIEZO1Q92508 2521 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 SLC15A5A6NIM6 579 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 SEMA3EO15041 775 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 CLTBP09497 229 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 PHKA1P46020 1223 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
CCDC18-208ENST00000479653 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 NPLOC4Q8TAT6 608 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 FANCIQ9NVI1 1328 aa13.88□□□□□ -0.19
CCDC18-208ENST00000479653 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 GRXCR1A8MXD5 290 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
CCDC18-208ENST00000479653 ASNSP08243 561 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 PBX2P40425 430 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 RHBDL3P58872 404 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 EPHX3Q9H6B9 360 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 TMEM39AQ9NV64 488 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 RABGAP1Q9Y3P9 1069 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 LTBP2Q14767 1821 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 MROH7-TTC4A0A0A0MT08 1334 aa13.87□□□□□ -0.19
CCDC18-208ENST00000479653 XIRP2A4UGR9 3374 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 GPR75-ASB3A0A0A6YYF3 556 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 BMP1P13497 986 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 CYBAP13498 195 aa13.86□□□□□ -0.19
CCDC18-208ENST00000479653 LRRC41Q15345 812 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms