RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 OGFOD3Q6PK18 319 aa8.8□□□□□ -1
CCDC58-204ENST00000479414 ZDHHC13Q8IUH4 622 aa8.8□□□□□ -1
CCDC58-204ENST00000479414 SHISA5Q8N114 240 aa8.8□□□□□ -1
CCDC58-204ENST00000479414 FBXL6Q8N531 539 aa8.8□□□□□ -1
CCDC58-204ENST00000479414 SHKBP1Q8TBC3 707 aa8.8□□□□□ -1
CCDC58-204ENST00000479414 MCM4P33991 863 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 SOX9P48436 509 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 CYP27A1Q02318 531 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 CPSF6Q16630 551 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC58-204ENST00000479414 PRAMEF13Q5VWM6 474 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 GK5Q6ZS86 529 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 MFSD2AQ8NA29 543 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 TINF2Q9BSI4 451 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 DUSP23Q9BVJ7 150 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 PRDM10Q9NQV6 1147 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 GINM1Q9NU53 330 aa8.79□□□□□ -1
CCDC58-204ENST00000479414 FAM170BA6NMN3 283 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 WDR64B1ANS9 1081 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 FAM87AP0C7U9 286 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 MLECQ14165 292 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 SLFN12Q8IYM2 578 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 SEC16BQ96JE7 1060 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 METTL22Q9BUU2 404 aaPredicted RBP8.78□□□□□ -1
CCDC58-204ENST00000479414 CAPN10Q9HC96 672 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 ZNRF3Q9ULT6 936 aa8.78□□□□□ -1
CCDC58-204ENST00000479414 DNAJA2O60884 412 aa8.77□□□□□ -1.01
CCDC58-204ENST00000479414 YARSP54577 528 aaKnown RBP8.77□□□□□ -1.01
CCDC58-204ENST00000479414 TOP6BLQ8N6T0 577 aa8.77□□□□□ -1.01
CCDC58-204ENST00000479414 FAM13CQ8NE31 585 aa8.77□□□□□ -1.01
CCDC58-204ENST00000479414 ATG3Q9NT62 314 aa8.77□□□□□ -1.01
CCDC58-204ENST00000479414 GMIPQ9P107 970 aa8.77□□□□□ -1.01
CCDC58-204ENST00000479414 EFR3BQ9Y2G0 817 aa8.77□□□□□ -1.01
CCDC58-204ENST00000479414 SLC22A31A6NKX4 558 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 MEIS3P2A8K0S8 358 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 LEFTY1O75610 366 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 IMPDH2P12268 514 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 ZC3H6P61129 1189 aaKnown RBP8.76□□□□□ -1.01
CCDC58-204ENST00000479414 GNL2Q13823 731 aaKnown RBP8.76□□□□□ -1.01
CCDC58-204ENST00000479414 LRRFIP1Q32MZ4 808 aaKnown RBP8.76□□□□□ -1.01
CCDC58-204ENST00000479414 CYP27C1Q4G0S4 372 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 DUSP27Q5VZP5 1158 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 ZNF765Q7L2R6 523 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
CCDC58-204ENST00000479414 PRR19A6NJB7 356 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 UPK3BL1B0FP48 263 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 CHURC1-FNTBB4DL54 471 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 UPK3BL2E5RIL1 263 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 SLITRK5O94991 958 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 SLC43A3Q8NBI5 491 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 CYB5D2Q8WUJ1 264 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 DPH2Q9BQC3 489 aaPredicted RBP8.75□□□□□ -1.01
CCDC58-204ENST00000479414 KLHL3Q9UH77 587 aa8.75□□□□□ -1.01
CCDC58-204ENST00000479414 EOMESO95936 686 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 ATF4P18848 351 aaPredicted RBP8.74□□□□□ -1.01
CCDC58-204ENST00000479414 RANGAP1P46060 587 aaPredicted RBP8.74□□□□□ -1.01
CCDC58-204ENST00000479414 NASPP49321 788 aaPredicted RBP8.74□□□□□ -1.01
CCDC58-204ENST00000479414 CDCP2Q5VXM1 449 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 LETMD1Q6P1Q0 360 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 FAM214BQ7L5A3 538 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 TMEM40Q8WWA1 233 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 FERD3LQ96RJ6 166 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 MIPEPQ99797 713 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 PPT2Q9UMR5 302 aa8.74□□□□□ -1.01
CCDC58-204ENST00000479414 OVOS1Q6IE37 1185 aa8.73□□□□□ -1.01
CCDC58-204ENST00000479414 VPS37DQ86XT2 251 aa8.73□□□□□ -1.01
CCDC58-204ENST00000479414 RBBP8NLQ8NC74 664 aaPredicted RBP8.73□□□□□ -1.01
CCDC58-204ENST00000479414 CNNM2Q9H8M5 875 aa8.73□□□□□ -1.01
CCDC58-204ENST00000479414 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
CCDC58-204ENST00000479414 RNF112Q9ULX5 631 aa8.73□□□□□ -1.01
CCDC58-204ENST00000479414 LEMD3Q9Y2U8 911 aa8.73□□□□□ -1.01
CCDC58-204ENST00000479414 DNAJB8Q8NHS0 232 aa8.72□□□□□ -1.01
CCDC58-204ENST00000479414 XAGE3Q8WTP9 111 aa8.72□□□□□ -1.01
CCDC58-204ENST00000479414 PPP1R13LQ8WUF5 828 aa8.72□□□□□ -1.01
CCDC58-204ENST00000479414 ATG4CQ96DT6 458 aa8.72□□□□□ -1.01
CCDC58-204ENST00000479414 ANTXR1Q9H6X2 564 aa8.72□□□□□ -1.01
CCDC58-204ENST00000479414 STRIP2Q9ULQ0 834 aa8.72□□□□□ -1.01
CCDC58-204ENST00000479414 IGF2BP3O00425 579 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCDC58-204ENST00000479414 TGFB1P01137 390 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 FOSL1P15407 271 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 ARSHQ5FYA8 562 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 NLRC3Q7RTR2 1065 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 RIN3Q8TB24 985 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 CCDC74BQ96LY2 380 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 HEXIM2Q96MH2 286 aaKnown RBP8.71□□□□□ -1.02
CCDC58-204ENST00000479414 GMLQ99445 158 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 SRRTQ9BXP5 876 aaKnown RBP8.71□□□□□ -1.02
CCDC58-204ENST00000479414 GTF2IRD1Q9UHL9 959 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 CEP131Q9UPN4 1083 aa8.71□□□□□ -1.02
CCDC58-204ENST00000479414 TNFRSF10CO14798 259 aa8.7□□□□□ -1.02
CCDC58-204ENST00000479414 RGS13O14921 159 aa8.7□□□□□ -1.02
CCDC58-204ENST00000479414 ARID5AQ03989 594 aa8.7□□□□□ -1.02
CCDC58-204ENST00000479414 NAALADL2Q58DX5 795 aa8.7□□□□□ -1.02
CCDC58-204ENST00000479414 ZNF746Q6NUN9 644 aaPredicted RBP8.7□□□□□ -1.02
CCDC58-204ENST00000479414 MAPK8IP1Q9UQF2 711 aa8.7□□□□□ -1.02
CCDC58-204ENST00000479414 CYP26A1O43174 497 aa8.69□□□□□ -1.02
CCDC58-204ENST00000479414 NME1P15531 152 aaKnown RBP8.69□□□□□ -1.02
CCDC58-204ENST00000479414 RAG1P15918 1043 aa8.69□□□□□ -1.02
CCDC58-204ENST00000479414 ETV3P41162 512 aa8.69□□□□□ -1.02
CCDC58-204ENST00000479414 GIPRP48546 466 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms