RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 SMCR8Q8TEV9 937 aaPredicted RBP10.98□□□□□ -0.65
CMTM1-208ENST00000479381 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
CMTM1-208ENST00000479381 PARK7Q99497 189 aaKnown RBP10.98□□□□□ -0.65
CMTM1-208ENST00000479381 PTPN18Q99952 460 aa10.98□□□□□ -0.65
CMTM1-208ENST00000479381 HERC5Q9UII4 1024 aaKnown RBP10.98□□□□□ -0.65
CMTM1-208ENST00000479381 ZNF112Q9UJU3 913 aa10.98□□□□□ -0.65
CMTM1-208ENST00000479381 PALD1Q9ULE6 856 aa10.98□□□□□ -0.65
CMTM1-208ENST00000479381 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
CMTM1-208ENST00000479381 RFX7Q2KHR2 1363 aa10.98□□□□□ -0.65
CMTM1-208ENST00000479381 ATAD5Q96QE3 1844 aa10.98□□□□□ -0.65
CMTM1-208ENST00000479381 MYH1P12882 1939 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-208ENST00000479381 GDF11O95390 407 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 PDE6AP16499 860 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 PTPRAP18433 802 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 FBXO46Q6PJ61 603 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-208ENST00000479381 TTC6Q86TZ1 520 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.97□□□□□ -0.65
CMTM1-208ENST00000479381 EDC3Q96F86 508 aaKnown RBP10.97□□□□□ -0.65
CMTM1-208ENST00000479381 FEZ1Q99689 392 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 TMOD4Q9NZQ9 345 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-208ENST00000479381 CPA4Q9UI42 421 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
CMTM1-208ENST00000479381 NAV1Q8NEY1 1877 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 USP17L5A8MUK1 530 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 MPHOSPH10O00566 681 aaKnown RBP10.96□□□□□ -0.65
CMTM1-208ENST00000479381 CXCL11O14625 94 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
CMTM1-208ENST00000479381 PPP4CP60510 307 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 NOM1Q5C9Z4 860 aaKnown RBP10.96□□□□□ -0.65
CMTM1-208ENST00000479381 ANKRD23Q86SG2 305 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 SLAIN1Q8ND83 568 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 CWC22Q9HCG8 908 aaKnown RBP10.96□□□□□ -0.65
CMTM1-208ENST00000479381 CABP5Q9NP86 173 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 BOLA1Q9Y3E2 137 aa10.96□□□□□ -0.65
CMTM1-208ENST00000479381 CDK5RAP2Q96SN8 1893 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-208ENST00000479381 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 ERC2O15083 957 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 TBC1D12O60347 775 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 TLR2O60603 784 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 MBD4O95243 580 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-208ENST00000479381 ASNSP08243 561 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 ATP5JP18859 108 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 OSBPP22059 807 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 CAP2P40123 477 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 SPP2Q13103 211 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 PABPC4Q13310 644 aaKnown RBP eCLIP10.95□□□□□ -0.66
CMTM1-208ENST00000479381 RAB3GAP1Q15042 981 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 LRRFIP1Q32MZ4 808 aaKnown RBP10.95□□□□□ -0.66
CMTM1-208ENST00000479381 TSHZ3Q63HK5 1081 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 TMED8Q6PL24 325 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-208ENST00000479381 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 FOXP4Q8IVH2 680 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-208ENST00000479381 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 ZCCHC17Q9NP64 241 aaKnown RBP10.95□□□□□ -0.66
CMTM1-208ENST00000479381 KCNH4Q9UQ05 1017 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 FOCADQ5VW36 1801 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 LAMB1P07942 1786 aa10.95□□□□□ -0.66
CMTM1-208ENST00000479381 MYH7P12883 1935 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 CYP2C8P10632 490 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 HMGCS2P54868 508 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-208ENST00000479381 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-208ENST00000479381 ZYXQ15942 572 aaKnown RBP10.94□□□□□ -0.66
CMTM1-208ENST00000479381 ANKRD45Q5TZF3 282 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 CCAR1Q8IX12 1150 aaKnown RBP10.94□□□□□ -0.66
CMTM1-208ENST00000479381 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 HAUS7Q99871 368 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 DCTPP1Q9H773 170 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 BIN2Q9UBW5 565 aaPredicted RBP10.94□□□□□ -0.66
CMTM1-208ENST00000479381 SERPINB13Q9UIV8 391 aa10.94□□□□□ -0.66
CMTM1-208ENST00000479381 A0A0G2JLL6 359 aaPredicted RBP10.93□□□□□ -0.66
CMTM1-208ENST00000479381 HOXD10P28358 340 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 ADD2P35612 726 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 MTMR2Q13614 643 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 CERKLQ49MI3 558 aaPredicted RBP10.93□□□□□ -0.66
CMTM1-208ENST00000479381 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 PRRT2Q7Z6L0 340 aaPredicted RBP10.93□□□□□ -0.66
CMTM1-208ENST00000479381 LCORLQ8N3X6 602 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 RAET1EQ8TD07 263 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
CMTM1-208ENST00000479381 AFG3L2Q9Y4W6 797 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 SLC4A4Q9Y6R1 1079 aa10.93□□□□□ -0.66
CMTM1-208ENST00000479381 RAD21O60216 631 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 GH2P01242 217 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 APPP05067 770 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 PSMC4P43686 418 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 FCGRTP55899 365 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms