RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 VSIG10LQ86VR7 867 aa8.94□□□□□ -0.98
ITGA4-209ENST00000478440 ARHGAP27Q6ZUM4 889 aa8.93□□□□□ -0.98
ITGA4-209ENST00000478440 SHISA5Q8N114 240 aa8.93□□□□□ -0.98
ITGA4-209ENST00000478440 GAL3ST3Q96A11 431 aa8.93□□□□□ -0.98
ITGA4-209ENST00000478440 FBXL18Q96ME1 805 aa8.93□□□□□ -0.98
ITGA4-209ENST00000478440 FAM161BQ96MY7 647 aa8.93□□□□□ -0.98
ITGA4-209ENST00000478440 MKNK2Q9HBH9 465 aa8.93□□□□□ -0.98
ITGA4-209ENST00000478440 MAP3K11Q16584 847 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 TSNAXIP1Q2TAA8 658 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 LRFN4Q6PJG9 635 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 CYFIP1Q7L576 1253 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 CCDC84Q86UT8 332 aaPredicted RBP8.92□□□□□ -0.98
ITGA4-209ENST00000478440 STK11IPQ8N1F8 1099 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 MISP3Q96FF7 219 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 PLPPR2Q96GM1 343 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 DUSP23Q9BVJ7 150 aa8.92□□□□□ -0.98
ITGA4-209ENST00000478440 PRAMEF27A3QJZ7 478 aa8.91□□□□□ -0.98
ITGA4-209ENST00000478440 CTSHP09668 335 aa8.91□□□□□ -0.98
ITGA4-209ENST00000478440 YBX3P16989 372 aaKnown RBP eCLIP8.91□□□□□ -0.98
ITGA4-209ENST00000478440 GP2P55259 537 aaKnown RBP8.91□□□□□ -0.98
ITGA4-209ENST00000478440 WIPI1Q5MNZ9 446 aaPredicted RBP8.91□□□□□ -0.98
ITGA4-209ENST00000478440 GIPC2Q8TF65 315 aa8.91□□□□□ -0.98
ITGA4-209ENST00000478440 WNT10AQ9GZT5 417 aa8.91□□□□□ -0.98
ITGA4-209ENST00000478440 GTF2IRD1Q9UHL9 959 aa8.91□□□□□ -0.98
ITGA4-209ENST00000478440 KIAA0586Q9BVV6 1533 aa8.9□□□□□ -0.98
ITGA4-209ENST00000478440 KIF27Q86VH2 1401 aa8.9□□□□□ -0.98
ITGA4-209ENST00000478440 NTF4P34130 210 aa8.9□□□□□ -0.98
ITGA4-209ENST00000478440 ETF1P62495 437 aaKnown RBP8.9□□□□□ -0.98
ITGA4-209ENST00000478440 INPP5AQ14642 412 aa8.9□□□□□ -0.98
ITGA4-209ENST00000478440 RELL1Q8IUW5 271 aa8.9□□□□□ -0.98
ITGA4-209ENST00000478440 TOP6BLQ8N6T0 577 aa8.9□□□□□ -0.98
ITGA4-209ENST00000478440 PRDM10Q9NQV6 1147 aa8.9□□□□□ -0.98
ITGA4-209ENST00000478440 ZC3H7BQ9UGR2 993 aaKnown RBP8.9□□□□□ -0.98
ITGA4-209ENST00000478440 CARMIL2Q6F5E8 1435 aa8.89□□□□□ -0.99
ITGA4-209ENST00000478440 LRIG2O94898 1065 aa8.89□□□□□ -0.99
ITGA4-209ENST00000478440 CAP2P40123 477 aa8.89□□□□□ -0.99
ITGA4-209ENST00000478440 HID1Q8IV36 788 aa8.89□□□□□ -0.99
ITGA4-209ENST00000478440 NETO1Q8TDF5 533 aa8.89□□□□□ -0.99
ITGA4-209ENST00000478440 CCDC39Q9UFE4 941 aa8.89□□□□□ -0.99
ITGA4-209ENST00000478440 PTPRGP23470 1445 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 PTPN11Q06124 597 aaPredicted RBP8.88□□□□□ -0.99
ITGA4-209ENST00000478440 PDE4BQ07343 736 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 SEPT6Q14141 434 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 MFSD2AQ8NA29 543 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 AGBL5Q8NDL9 886 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 PHC3Q8NDX5 983 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 RSRP1Q9BUV0 290 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 PCDHB5Q9Y5E4 795 aa8.88□□□□□ -0.99
ITGA4-209ENST00000478440 IGF2BP3O00425 579 aaKnown RBP eCLIP8.87□□□□□ -0.99
ITGA4-209ENST00000478440 BPNT1O95861 308 aa8.87□□□□□ -0.99
ITGA4-209ENST00000478440 TFE3P19532 575 aaPredicted RBP8.87□□□□□ -0.99
ITGA4-209ENST00000478440 TAGLNQ01995 201 aaKnown RBP8.87□□□□□ -0.99
ITGA4-209ENST00000478440 RPL6Q02878 288 aaKnown RBP8.87□□□□□ -0.99
ITGA4-209ENST00000478440 FOXQ1Q9C009 403 aa8.87□□□□□ -0.99
ITGA4-209ENST00000478440 SLC5A6Q9Y289 635 aa8.87□□□□□ -0.99
ITGA4-209ENST00000478440 IQGAP2Q13576 1575 aa8.86□□□□□ -0.99
ITGA4-209ENST00000478440 LEFTY1O75610 366 aa8.86□□□□□ -0.99
ITGA4-209ENST00000478440 IRAK1P51617 712 aa8.86□□□□□ -0.99
ITGA4-209ENST00000478440 LMNB2Q03252 620 aa8.86□□□□□ -0.99
ITGA4-209ENST00000478440 IFI16Q16666 785 aaKnown RBP8.86□□□□□ -0.99
ITGA4-209ENST00000478440 ZNF746Q6NUN9 644 aaPredicted RBP8.86□□□□□ -0.99
ITGA4-209ENST00000478440 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.86□□□□□ -0.99
ITGA4-209ENST00000478440 ARMCX6Q7L4S7 300 aa8.86□□□□□ -0.99
ITGA4-209ENST00000478440 TMEM265A0A087WTH1 108 aa8.85□□□□□ -0.99
ITGA4-209ENST00000478440 GFRA2O00451 464 aa8.85□□□□□ -0.99
ITGA4-209ENST00000478440 GBP2P32456 591 aaPredicted RBP8.85□□□□□ -0.99
ITGA4-209ENST00000478440 FLCNQ8NFG4 579 aa8.85□□□□□ -0.99
ITGA4-209ENST00000478440 JARID2Q92833 1246 aaPredicted RBP8.85□□□□□ -0.99
ITGA4-209ENST00000478440 TMEM74Q96NL1 305 aa8.85□□□□□ -0.99
ITGA4-209ENST00000478440 OAS3Q9Y6K5 1087 aaKnown RBP8.85□□□□□ -0.99
ITGA4-209ENST00000478440 ARID1BQ8NFD5 2236 aaPredicted RBP8.85□□□□□ -0.99
ITGA4-209ENST00000478440 ABCC2Q92887 1545 aa8.85□□□□□ -0.99
ITGA4-209ENST00000478440 GRK4P32298 578 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
ITGA4-209ENST00000478440 ASXL2Q76L83 1435 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 TP53INP2Q8IXH6 220 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 PRDM5Q9NQX1 630 aaPredicted RBP8.84□□□□□ -0.99
ITGA4-209ENST00000478440 ADAM30Q9UKF2 790 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 VAV3Q9UKW4 847 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 MAPK8IP1Q9UQF2 711 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 TLR6Q9Y2C9 796 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 SNX11Q9Y5W9 270 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 CARMIL1Q5VZK9 1371 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 TNIKQ9UKE5 1360 aa8.84□□□□□ -0.99
ITGA4-209ENST00000478440 PLB1Q6P1J6 1458 aa8.83□□□□□ -1
ITGA4-209ENST00000478440 GNAT3A8MTJ3 354 aa8.83□□□□□ -1
ITGA4-209ENST00000478440 CEACAM5P06731 702 aa8.83□□□□□ -1
ITGA4-209ENST00000478440 OXCT1P55809 520 aa8.83□□□□□ -1
ITGA4-209ENST00000478440 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
ITGA4-209ENST00000478440 COX4I2Q96KJ9 171 aa8.83□□□□□ -1
ITGA4-209ENST00000478440 PPRC1Q5VV67 1664 aaKnown RBP8.83□□□□□ -1
ITGA4-209ENST00000478440 ADGRL1O94910 1474 aa8.83□□□□□ -1
ITGA4-209ENST00000478440 ADAMTS4O75173 837 aa8.82□□□□□ -1
ITGA4-209ENST00000478440 CST3P01034 146 aaPredicted RBP8.82□□□□□ -1
ITGA4-209ENST00000478440 PGRP06401 933 aa8.82□□□□□ -1
ITGA4-209ENST00000478440 CYP7A1P22680 504 aa8.82□□□□□ -1
ITGA4-209ENST00000478440 TXKP42681 527 aa8.82□□□□□ -1
ITGA4-209ENST00000478440 PRKCQQ04759 706 aa8.82□□□□□ -1
ITGA4-209ENST00000478440 MRPL58Q14197 206 aaKnown RBP8.82□□□□□ -1
ITGA4-209ENST00000478440 SLBPQ14493 270 aaKnown RBP eCLIP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms