RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 MTMR2Q13614 643 aa20.44■□□□□ 0.86
TRIM13-208ENST00000478111 MORF4L1Q9UBU8 362 aa20.44■□□□□ 0.86
TRIM13-208ENST00000478111 ALPK3Q96L96 1907 aa20.44■□□□□ 0.86
TRIM13-208ENST00000478111 FARP2O94887 1054 aaPredicted RBP20.43■□□□□ 0.86
TRIM13-208ENST00000478111 GDF11O95390 407 aa20.43■□□□□ 0.86
TRIM13-208ENST00000478111 CYP7A1P22680 504 aa20.43■□□□□ 0.86
TRIM13-208ENST00000478111 HOXA7P31268 230 aaPredicted RBP20.43■□□□□ 0.86
TRIM13-208ENST00000478111 DEFB118Q96PH6 123 aa20.43■□□□□ 0.86
TRIM13-208ENST00000478111 SAP30BPQ9UHR5 308 aaKnown RBP20.43■□□□□ 0.86
TRIM13-208ENST00000478111 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
TRIM13-208ENST00000478111 CRACR2BQ8N4Y2 399 aaPredicted RBP20.42■□□□□ 0.86
TRIM13-208ENST00000478111 P2RX7Q99572 595 aaKnown RBP20.42■□□□□ 0.86
TRIM13-208ENST00000478111 HTATIP2Q9BUP3 242 aa20.42■□□□□ 0.86
TRIM13-208ENST00000478111 CRISPLD2Q9H0B8 497 aa20.42■□□□□ 0.86
TRIM13-208ENST00000478111 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
TRIM13-208ENST00000478111 GINM1Q9NU53 330 aa20.42■□□□□ 0.86
TRIM13-208ENST00000478111 ZBTB21Q9ULJ3 1066 aa20.42■□□□□ 0.86
TRIM13-208ENST00000478111 LAMA3Q16787 3333 aa20.42■□□□□ 0.86
TRIM13-208ENST00000478111 PEX10O60683 326 aa20.41■□□□□ 0.86
TRIM13-208ENST00000478111 CHRDL2Q6WN34 429 aa20.41■□□□□ 0.86
TRIM13-208ENST00000478111 TAOK2Q9UL54 1235 aa20.41■□□□□ 0.86
TRIM13-208ENST00000478111 C19orf81C9J6K1 198 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 USP17L10C9JJH3 530 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 IDH1O75874 414 aaKnown RBP20.4■□□□□ 0.86
TRIM13-208ENST00000478111 CAPN2P17655 700 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 POTEEQ6S8J3 1075 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 MIGA1Q8NAN2 632 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 PANK1Q8TE04 598 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 PRO3102Q9H379 93 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 TXNRD2Q9NNW7 524 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 TMOD4Q9NZQ9 345 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 EXOC6BQ9Y2D4 811 aa20.4■□□□□ 0.86
TRIM13-208ENST00000478111 TFRCP02786 760 aaKnown RBP20.39■□□□□ 0.85
TRIM13-208ENST00000478111 IRX3P78415 501 aaPredicted RBP20.39■□□□□ 0.85
TRIM13-208ENST00000478111 TRIM32Q13049 653 aa20.39■□□□□ 0.85
TRIM13-208ENST00000478111 TATDN1Q6P1N9 297 aa20.39■□□□□ 0.85
TRIM13-208ENST00000478111 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.85
TRIM13-208ENST00000478111 EMILIN3Q9NT22 766 aa20.39■□□□□ 0.85
TRIM13-208ENST00000478111 RBM27Q9P2N5 1060 aaKnown RBP20.39■□□□□ 0.85
TRIM13-208ENST00000478111 RBPJLQ9UBG7 517 aa20.39■□□□□ 0.85
TRIM13-208ENST00000478111 HMGCRP04035 888 aa20.38■□□□□ 0.85
TRIM13-208ENST00000478111 HLA-DOAP06340 250 aa20.38■□□□□ 0.85
TRIM13-208ENST00000478111 HERVK_113P62684 666 aa20.38■□□□□ 0.85
TRIM13-208ENST00000478111 TRIM34Q9BYJ4 488 aa20.38■□□□□ 0.85
TRIM13-208ENST00000478111 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.38■□□□□ 0.855e-7■■■■■ 28.2
TRIM13-208ENST00000478111 DDX60LQ5H9U9 1706 aaKnown RBP20.38■□□□□ 0.85
TRIM13-208ENST00000478111 GH2P01242 217 aa20.37■□□□□ 0.85
TRIM13-208ENST00000478111 Q3C1V9 767 aa20.37■□□□□ 0.85
TRIM13-208ENST00000478111 AACSQ86V21 672 aa20.37■□□□□ 0.85
TRIM13-208ENST00000478111 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 USP5P45974 858 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 CERS3Q8IU89 383 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 ERC1Q8IUD2 1116 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 GPRC5AQ8NFJ5 357 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 TRIB2Q92519 343 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 PAWRQ96IZ0 340 aaKnown RBP20.36■□□□□ 0.85
TRIM13-208ENST00000478111 RIOK1Q9BRS2 568 aaKnown RBP20.36■□□□□ 0.85
TRIM13-208ENST00000478111 EHD4Q9H223 541 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 DNAH12Q6ZR08 3092 aa20.36■□□□□ 0.85
TRIM13-208ENST00000478111 RPTORQ8N122 1335 aa20.35■□□□□ 0.85
TRIM13-208ENST00000478111 MNX1P50219 401 aaPredicted RBP20.35■□□□□ 0.85
TRIM13-208ENST00000478111 MAP3K12Q12852 859 aa20.35■□□□□ 0.85
TRIM13-208ENST00000478111 TMED8Q6PL24 325 aaPredicted RBP20.35■□□□□ 0.85
TRIM13-208ENST00000478111 RHPN1Q8TCX5 695 aa20.35■□□□□ 0.85
TRIM13-208ENST00000478111 DIS3LQ8TF46 1054 aaKnown RBP20.35■□□□□ 0.85
TRIM13-208ENST00000478111 IL1RAPL2Q9NP60 686 aa20.35■□□□□ 0.85
TRIM13-208ENST00000478111 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
TRIM13-208ENST00000478111 NR2E3Q9Y5X4 410 aa20.35■□□□□ 0.85
TRIM13-208ENST00000478111 NAV1Q8NEY1 1877 aa20.35■□□□□ 0.85
TRIM13-208ENST00000478111 CYP2B6P20813 491 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 ERVK-9P63128 1117 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 ERVK-24P63145 666 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 MAP3K21Q5TCX8 1036 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 USP17L2Q6R6M4 530 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 USP6NLQ92738 828 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 C12orf42Q96LP6 360 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 PORCNQ9H237 461 aa20.34■□□□□ 0.85
TRIM13-208ENST00000478111 HMX1Q9NP08 348 aaPredicted RBP20.34■□□□□ 0.85
TRIM13-208ENST00000478111 SHMT1P34896 483 aa20.33■□□□□ 0.85
TRIM13-208ENST00000478111 PLCD1P51178 756 aa20.33■□□□□ 0.85
TRIM13-208ENST00000478111 ANKLE1Q8NAG6 615 aa20.33■□□□□ 0.85
TRIM13-208ENST00000478111 EVI5O60447 810 aa20.32■□□□□ 0.84
TRIM13-208ENST00000478111 XRCC5P13010 732 aaKnown RBP20.32■□□□□ 0.84
TRIM13-208ENST00000478111 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
TRIM13-208ENST00000478111 NECAB2Q7Z6G3 386 aa20.32■□□□□ 0.84
TRIM13-208ENST00000478111 TTC6Q86TZ1 520 aa20.32■□□□□ 0.84
TRIM13-208ENST00000478111 SIRT2Q8IXJ6 389 aa20.32■□□□□ 0.84
TRIM13-208ENST00000478111 NUDT12Q9BQG2 462 aa20.32■□□□□ 0.84
TRIM13-208ENST00000478111 CNMDO75829 334 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 MAPK4P31152 587 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 GUCY1A2P33402 732 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 EVX2Q03828 476 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 CERKLQ49MI3 558 aaPredicted RBP20.31■□□□□ 0.84
TRIM13-208ENST00000478111 HSP90AB4PQ58FF6 505 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 MORN1Q5T089 497 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 ACER1Q8TDN7 264 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 SOCS4Q8WXH5 440 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 PAGR1Q9BTK6 254 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 OGDHLQ9ULD0 1010 aa20.31■□□□□ 0.84
TRIM13-208ENST00000478111 USP17L15C9J2P7 530 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms