RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 CYP2D7A0A087X1C5 515 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 CYP2D6P10635 497 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 FZD1Q9UP38 647 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 PPP2R3BQ9Y5P8 575 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 SSC5DA1L4H1 1573 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 PASKQ96RG2 1323 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 PLCD1P51178 756 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
CBWD3-206ENST00000478048 PTH1RQ03431 593 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 CSRNP1Q96S65 589 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
CBWD3-206ENST00000478048 ATRNL1Q5VV63 1379 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 RPAP1Q9BWH6 1393 aaPredicted RBP13.69□□□□□ -0.22
CBWD3-206ENST00000478048 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 USP17L21D6R901 530 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 TDO2P48775 406 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 PRKG1Q13976 671 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 CTR9Q6PD62 1173 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 ADGRD1Q6QNK2 874 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
CBWD3-206ENST00000478048 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 TK2O00142 265 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 FGAP02671 866 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-206ENST00000478048 FSTL1Q12841 308 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 CST9Q5W186 159 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 GIMAP6Q6P9H5 292 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 MIGA2Q7L4E1 593 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 DHX36Q9H2U1 1008 aaKnown RBP13.68□□□□□ -0.22
CBWD3-206ENST00000478048 TRPM7Q96QT4 1865 aa13.68□□□□□ -0.22
CBWD3-206ENST00000478048 COL2A1P02458 1487 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-206ENST00000478048 CELF2O95319 508 aaKnown RBP13.67□□□□□ -0.22
CBWD3-206ENST00000478048 MOB2Q70IA6 237 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 NACAP1Q9BZK3 213 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
CBWD3-206ENST00000478048 CRISPLD2Q9H0B8 497 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 NAPBQ9H115 298 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 MINDY4BA8MYZ0 360 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 ALX1Q15699 326 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 SUPT20HL1Q3ZLR7 823 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 C12orf60Q5U649 245 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 ANO2Q9NQ90 1003 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 PI4KBQ9UBF8 816 aa13.67□□□□□ -0.22
CBWD3-206ENST00000478048 ARPP21Q9UBL0 812 aaPredicted RBP13.67□□□□□ -0.22
CBWD3-206ENST00000478048 C8orf34Q49A92 452 aa13.66□□□□□ -0.22
CBWD3-206ENST00000478048 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
CBWD3-206ENST00000478048 TTC6Q86TZ1 520 aa13.66□□□□□ -0.22
CBWD3-206ENST00000478048 DYNLL2Q96FJ2 89 aa13.66□□□□□ -0.22
CBWD3-206ENST00000478048 LAMB1P07942 1786 aa13.66□□□□□ -0.22
CBWD3-206ENST00000478048 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
CBWD3-206ENST00000478048 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
CBWD3-206ENST00000478048 NF2P35240 595 aa13.65□□□□□ -0.22
CBWD3-206ENST00000478048 HAND2P61296 217 aa13.65□□□□□ -0.22
CBWD3-206ENST00000478048 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
CBWD3-206ENST00000478048 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
CBWD3-206ENST00000478048 MAP4K1Q92918 833 aa13.65□□□□□ -0.22
CBWD3-206ENST00000478048 MAP3K10Q02779 954 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 GABPAQ06546 454 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 PPARAQ07869 468 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 METTL16Q86W50 562 aaKnown RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 EHD4Q9H223 541 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 SERPINB13Q9UIV8 391 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 CTDSPL2Q05D32 466 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 TTLL12Q14166 644 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 RRP1BQ14684 758 aaKnown RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 FOXP4Q8IVH2 680 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 CRACR2BQ8N4Y2 399 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 GBA2Q9HCG7 927 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
CBWD3-206ENST00000478048 ANGEL1Q9UNK9 670 aaKnown RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
CBWD3-206ENST00000478048 UBE2Q2LH0YL09 131 aa13.63□□□□□ -0.23
CBWD3-206ENST00000478048 DCAF15Q66K64 600 aa13.63□□□□□ -0.23
CBWD3-206ENST00000478048 KLRG1Q96E93 195 aa13.63□□□□□ -0.23
CBWD3-206ENST00000478048 HOOK2Q96ED9 719 aa13.63□□□□□ -0.23
CBWD3-206ENST00000478048 ZNF341Q9BYN7 854 aa13.63□□□□□ -0.23
CBWD3-206ENST00000478048 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
CBWD3-206ENST00000478048 HERC5Q9UII4 1024 aaKnown RBP13.63□□□□□ -0.23
CBWD3-206ENST00000478048 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 PHF20L1A8MW92 1017 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-206ENST00000478048 INPP5BP32019 993 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 SHMT1P34896 483 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 CDK8P49336 464 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 SHROOM1Q2M3G4 852 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-206ENST00000478048 PPP1R15BQ5SWA1 713 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 TAF6LQ9Y6J9 622 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
CBWD3-206ENST00000478048 ROBO3Q96MS0 1386 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms