RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.93
VMA21-203ENST00000477649 SEC23AQ15436 765 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 RRP12Q5JTH9 1297 aaKnown RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 MFSD14BQ5SR56 506 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 IFIT1BQ5T764 474 aaKnown RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 C12orf60Q5U649 245 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 DGKHQ86XP1 1220 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 C2CD5Q86YS7 1000 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 ZNF654Q8IZM8 581 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 LEO1Q8WVC0 666 aaPredicted RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 RNF26Q9BY78 433 aaPredicted RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 VPS33BQ9H267 617 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 NCOA5Q9HCD5 579 aaKnown RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 TCP11L1Q9NUJ3 509 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 DDX19AQ9NUU7 478 aaKnown RBP9.23□□□□□ -0.93
VMA21-203ENST00000477649 MCM9Q9NXL9 1143 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 RCOR1Q9UKL0 485 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 CCDC88AQ3V6T2 1871 aa9.23□□□□□ -0.93
VMA21-203ENST00000477649 TAF1P21675 1872 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 MYO5AQ9Y4I1 1855 aaKnown RBP9.22□□□□□ -0.93
VMA21-203ENST00000477649 DEXIO95424 95 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 KIF5BP33176 963 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 GNAQP50148 359 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 AKAP17AQ02040 695 aaKnown RBP9.22□□□□□ -0.93
VMA21-203ENST00000477649 NTRK3Q16288 839 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 HHIPL2Q6UWX4 724 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 MICU3Q86XE3 530 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
VMA21-203ENST00000477649 FANCBQ8NB91 859 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 KCNG4Q8TDN1 519 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 ALG1Q9BT22 464 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 RTFDC1Q9BY42 306 aaPredicted RBP9.22□□□□□ -0.93
VMA21-203ENST00000477649 GPHNQ9NQX3 736 aaPredicted RBP9.22□□□□□ -0.93
VMA21-203ENST00000477649 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 TNKSO95271 1327 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
VMA21-203ENST00000477649 CTAGE5O15320 804 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 RANBP6O60518 1105 aaKnown RBP9.21□□□□□ -0.94
VMA21-203ENST00000477649 CAVIN2O95810 425 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 TTC6Q86TZ1 520 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 FERMT3Q86UX7 667 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 ZNF444Q8N0Y2 327 aaPredicted RBP9.21□□□□□ -0.94
VMA21-203ENST00000477649 ENAHQ8N8S7 591 aaPredicted RBP9.21□□□□□ -0.94
VMA21-203ENST00000477649 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 LZTS2Q9BRK4 669 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 RTEL1Q9NZ71 1219 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 TMEM63CQ9P1W3 806 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 MORC2Q9Y6X9 1032 aaPredicted RBP9.21□□□□□ -0.94
VMA21-203ENST00000477649 MYO3BQ8WXR4 1341 aa9.21□□□□□ -0.94
VMA21-203ENST00000477649 ANKRD31Q8N7Z5 1873 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 A0A1W2PQ27 194 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 A0A1W2PQ64 194 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 A0A1W2PQD8 194 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 TSPY2A6NKD2 308 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 XRCC6P12956 609 aaKnown RBP eCLIP9.2□□□□□ -0.94
VMA21-203ENST00000477649 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 BTDP43251 543 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 KIF23Q02241 960 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 UVSSAQ2YD98 709 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 STRIP1Q5VSL9 837 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 TEX11Q8IYF3 940 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 CRACR2BQ8N4Y2 399 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 CTCFLQ8NI51 663 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 ZNF622Q969S3 477 aaKnown RBP eCLIP9.2□□□□□ -0.94
VMA21-203ENST00000477649 FOXP1Q9H334 677 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 MKNK2Q9HBH9 465 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 GDPD2Q9HCC8 539 aa9.2□□□□□ -0.94
VMA21-203ENST00000477649 FAM217BQ9NTX9 383 aaPredicted RBP9.2□□□□□ -0.94
VMA21-203ENST00000477649 PRPF3O43395 683 aaKnown RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 BMP15O95972 392 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.94
VMA21-203ENST00000477649 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 CDC27P30260 824 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 NASPP49321 788 aaPredicted RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 MMP14P50281 582 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 GTF2IP78347 998 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 EN1Q05925 392 aaPredicted RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 TROAPQ12815 778 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 GNL2Q13823 731 aaKnown RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 EZH2Q15910 746 aaKnown RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 KRT40Q6A162 431 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 C16orf86Q6ZW13 317 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 RTKN2Q8IZC4 609 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 SH3RF3Q8TEJ3 882 aaPredicted RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 TGFBRAP1Q8WUH2 860 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 TEKT1Q969V4 418 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
VMA21-203ENST00000477649 SLC26A6Q9BXS9 759 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 BRMS1Q9HCU9 246 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 SWAP70Q9UH65 585 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms