RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 HMX1Q9NP08 348 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-204ENST00000477429 GNL3LQ9NVN8 582 aaKnown RBP12.15□□□□□ -0.46
COL4A5-204ENST00000477429 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 DNAH12Q6ZR08 3092 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 BAHCC1Q9P281 2608 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 MRE11P49959 708 aa12.14□□□□□ -0.47
COL4A5-204ENST00000477429 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
COL4A5-204ENST00000477429 USP6NLQ92738 828 aa12.14□□□□□ -0.47
COL4A5-204ENST00000477429 NSUN4Q96CB9 384 aaKnown RBP12.14□□□□□ -0.47
COL4A5-204ENST00000477429 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
COL4A5-204ENST00000477429 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
COL4A5-204ENST00000477429 MEIS3Q99687 375 aa12.14□□□□□ -0.47
COL4A5-204ENST00000477429 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
COL4A5-204ENST00000477429 OSBPL5Q9H0X9 879 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-204ENST00000477429 RBPJLQ9UBG7 517 aa12.14□□□□□ -0.47
COL4A5-204ENST00000477429 A0A1B0GUL7 405 aa12.13□□□□□ -0.47
COL4A5-204ENST00000477429 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-204ENST00000477429 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-204ENST00000477429 MTMR2Q13614 643 aa12.13□□□□□ -0.47
COL4A5-204ENST00000477429 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-204ENST00000477429 LRFN3Q9BTN0 628 aa12.13□□□□□ -0.47
COL4A5-204ENST00000477429 COPRSQ9NQ92 184 aa12.13□□□□□ -0.47
COL4A5-204ENST00000477429 FLRT1Q9NZU1 646 aa12.13□□□□□ -0.47
COL4A5-204ENST00000477429 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
COL4A5-204ENST00000477429 COL2A1P02458 1487 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-204ENST00000477429 PDS5AQ29RF7 1337 aaKnown RBP12.12□□□□□ -0.47
COL4A5-204ENST00000477429 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
COL4A5-204ENST00000477429 UBTFL1P0CB47 393 aaPredicted RBP12.12□□□□□ -0.47
COL4A5-204ENST00000477429 ADGRA1Q86SQ6 560 aa12.12□□□□□ -0.47
COL4A5-204ENST00000477429 USP38Q8NB14 1042 aa12.12□□□□□ -0.47
COL4A5-204ENST00000477429 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
COL4A5-204ENST00000477429 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
COL4A5-204ENST00000477429 CNMDO75829 334 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 CAPN2P17655 700 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 HERVK_113P62684 666 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 MORN1Q5T089 497 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 MYLIPQ8WY64 445 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
COL4A5-204ENST00000477429 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
COL4A5-204ENST00000477429 GDF11O95390 407 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
COL4A5-204ENST00000477429 MCAMP43121 646 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 BACE1P56817 501 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 GPR142Q7Z601 462 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 SPATA5Q8NB90 893 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 TRPV1Q8NER1 839 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 WDR18Q9BV38 432 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 EMILIN3Q9NT22 766 aa12.1□□□□□ -0.47
COL4A5-204ENST00000477429 XRCC5P13010 732 aaKnown RBP12.09□□□□□ -0.47
COL4A5-204ENST00000477429 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 ERVK-24P63145 666 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 TEX11Q8IYF3 940 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
COL4A5-204ENST00000477429 GPRC5AQ8NFJ5 357 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 ADAMTS19Q8TE59 1207 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 NUDT12Q9BQG2 462 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 C1QTNF1Q9BXJ1 281 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 CACNA1BQ00975 2339 aa12.09□□□□□ -0.47
COL4A5-204ENST00000477429 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.47
COL4A5-204ENST00000477429 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-204ENST00000477429 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-204ENST00000477429 C9orf50Q5SZB4 431 aa12.08□□□□□ -0.48
COL4A5-204ENST00000477429 SPTY2D1Q68D10 685 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-204ENST00000477429 NEUROD6Q96NK8 337 aa12.08□□□□□ -0.48
COL4A5-204ENST00000477429 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
COL4A5-204ENST00000477429 AATFQ9NY61 560 aaKnown RBP eCLIP12.08□□□□□ -0.48
COL4A5-204ENST00000477429 RAI14Q9P0K7 980 aa12.08□□□□□ -0.48
COL4A5-204ENST00000477429 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
COL4A5-204ENST00000477429 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 ANP32CO43423 234 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 IGHA2P01877 340 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 ZKSCAN1P17029 563 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-204ENST00000477429 ARID4AP29374 1257 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-204ENST00000477429 DYNLL1P63167 89 aaKnown RBP12.07□□□□□ -0.48
COL4A5-204ENST00000477429 PABPC4Q13310 644 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL4A5-204ENST00000477429 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
COL4A5-204ENST00000477429 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 NPLOC4Q8TAT6 608 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 TGFBRAP1Q8WUH2 860 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 CFAP54Q96N23 3096 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 SENP6Q9GZR1 1112 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-204ENST00000477429 BTBD7Q9P203 1132 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 SAP30BPQ9UHR5 308 aaKnown RBP12.07□□□□□ -0.48
COL4A5-204ENST00000477429 ZBTB21Q9ULJ3 1066 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 MAST2Q6P0Q8 1798 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 FLT1P17948 1338 aa12.07□□□□□ -0.48
COL4A5-204ENST00000477429 PNMA6EA0A0J9YXQ4 647 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 E9PSI1 815 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 SRGAP3O43295 1099 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 CYP2C19P33261 490 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 EVX2Q03828 476 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 MVPQ14764 893 aaKnown RBP12.06□□□□□ -0.48
COL4A5-204ENST00000477429 SHHQ15465 462 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms