RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZSWIM5Q9P217 1185 aa5.85□□□□□ -1.47
XRN1-211ENST00000477237 CNOT6Q9ULM6 557 aaKnown RBP5.85□□□□□ -1.47
XRN1-211ENST00000477237 LRIG2O94898 1065 aa5.84□□□□□ -1.47
XRN1-211ENST00000477237 NME2P22392 152 aa5.84□□□□□ -1.47
XRN1-211ENST00000477237 TCERG1LQ5VWI1 586 aa5.84□□□□□ -1.47
XRN1-211ENST00000477237 PHLDB3Q6NSJ2 640 aa5.84□□□□□ -1.47
XRN1-211ENST00000477237 EPS8L3Q8TE67 593 aaKnown RBP5.84□□□□□ -1.47
XRN1-211ENST00000477237 ADAMTS10Q9H324 1103 aa5.84□□□□□ -1.47
XRN1-211ENST00000477237 SP110Q9HB58 689 aa5.84□□□□□ -1.47
XRN1-211ENST00000477237 BRPF3Q9ULD4 1205 aa5.84□□□□□ -1.47
XRN1-211ENST00000477237 TMEM88BA6NKF7 163 aa5.83□□□□□ -1.48
XRN1-211ENST00000477237 EIF1AYO14602 144 aaKnown RBP5.83□□□□□ -1.48
XRN1-211ENST00000477237 ESR1P03372 595 aa5.83□□□□□ -1.48
XRN1-211ENST00000477237 RIN3Q8TB24 985 aa5.83□□□□□ -1.48
XRN1-211ENST00000477237 EMILIN2Q9BXX0 1053 aa5.83□□□□□ -1.48
XRN1-211ENST00000477237 CBX8Q9HC52 389 aa5.83□□□□□ -1.48
XRN1-211ENST00000477237 GCM1Q9NP62 436 aa5.83□□□□□ -1.48
XRN1-211ENST00000477237 SEMA7AO75326 666 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 CBX7O95931 251 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 ZNF605Q86T29 641 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 KCT2Q8NC54 265 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 GRIN3AQ8TCU5 1115 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 FAM129BQ96TA1 746 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 MIPEPQ99797 713 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 MTMR7Q9Y216 660 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 KCTD3Q9Y597 815 aa5.82□□□□□ -1.48
XRN1-211ENST00000477237 OTOL1A6NHN0 477 aaPredicted RBP5.81□□□□□ -1.48
XRN1-211ENST00000477237 PEX10O60683 326 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 ADRB1P08588 477 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 CELA3BP08861 270 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 ZNF385BQ569K4 471 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 IRF2BP1Q8IU81 584 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 SGPP1Q9BX95 441 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 C19orf44Q9H6X5 657 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 FBRSQ9HAH7 460 aa5.81□□□□□ -1.48
XRN1-211ENST00000477237 WASH4PA8MWX3 477 aa5.8□□□□□ -1.48
XRN1-211ENST00000477237 TNK2Q07912 1038 aa5.8□□□□□ -1.48
XRN1-211ENST00000477237 SLBPQ14493 270 aaKnown RBP eCLIP5.8□□□□□ -1.48
XRN1-211ENST00000477237 SSPNQ14714 243 aa5.8□□□□□ -1.48
XRN1-211ENST00000477237 ZNF507Q8TCN5 953 aa5.8□□□□□ -1.48
XRN1-211ENST00000477237 TEX51A0A1B0GUA7 166 aa5.79□□□□□ -1.48
XRN1-211ENST00000477237 BMP6P22004 513 aa5.79□□□□□ -1.48
XRN1-211ENST00000477237 TIGD5Q53EQ6 642 aa5.79□□□□□ -1.48
XRN1-211ENST00000477237 TMEM132EQ6IEE7 984 aa5.79□□□□□ -1.48
XRN1-211ENST00000477237 TMPRSS7Q7RTY8 843 aa5.79□□□□□ -1.48
XRN1-211ENST00000477237 SLC6A17Q9H1V8 727 aa5.79□□□□□ -1.48
XRN1-211ENST00000477237 AKAP2Q9Y2D5 859 aa5.79□□□□□ -1.48
XRN1-211ENST00000477237 GPR182O15218 404 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 ICMTO60725 284 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 TRIM37O94972 964 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 IGHA2P01877 340 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 XRCC5P13010 732 aaKnown RBP5.78□□□□□ -1.48
XRN1-211ENST00000477237 PDE3BQ13370 1112 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 NKG7Q16617 165 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 PI16Q6UXB8 463 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 TMEM151BQ8IW70 566 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 PANK1Q8TE04 598 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 NIF3L1Q9GZT8 377 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 ZNF552Q9H707 407 aaPredicted RBP5.78□□□□□ -1.48
XRN1-211ENST00000477237 PCDHA4Q9UN74 947 aa5.78□□□□□ -1.48
XRN1-211ENST00000477237 RFXAPO00287 272 aa5.77□□□□□ -1.49
XRN1-211ENST00000477237 SASH1O94885 1247 aa5.77□□□□□ -1.49
XRN1-211ENST00000477237 LETMD1Q6P1Q0 360 aa5.77□□□□□ -1.49
XRN1-211ENST00000477237 CREG2Q8IUH2 290 aa5.77□□□□□ -1.49
XRN1-211ENST00000477237 FEZF2Q8TBJ5 459 aa5.77□□□□□ -1.49
XRN1-211ENST00000477237 BORCS6Q96GS4 357 aa5.77□□□□□ -1.49
XRN1-211ENST00000477237 NDUFB5O43674 189 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 PSPNO60542 156 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 PAGE1O75459 146 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 ARHGAP4P98171 946 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 INPP5AQ14642 412 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 ZXDCQ2QGD7 858 aaPredicted RBP5.76□□□□□ -1.49
XRN1-211ENST00000477237 RASIP1Q5U651 963 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 LILRA2Q8N149 483 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 MFSD2AQ8NA29 543 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 PDZD8Q8NEN9 1154 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 ELMO3Q96BJ8 720 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 INTS4Q96HW7 963 aaKnown RBP5.76□□□□□ -1.49
XRN1-211ENST00000477237 NECAB3Q96P71 396 aaPredicted RBP5.76□□□□□ -1.49
XRN1-211ENST00000477237 BCO2Q9BYV7 579 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 PPP4R2Q9NY27 417 aa5.76□□□□□ -1.49
XRN1-211ENST00000477237 YBX2Q9Y2T7 364 aaKnown RBP5.76□□□□□ -1.49
XRN1-211ENST00000477237 PRAMEF27A3QJZ7 478 aa5.75□□□□□ -1.49
XRN1-211ENST00000477237 ZGLP1P0C6A0 271 aa5.75□□□□□ -1.49
XRN1-211ENST00000477237 PI3P19957 117 aa5.75□□□□□ -1.49
XRN1-211ENST00000477237 CAP2P40123 477 aa5.75□□□□□ -1.49
XRN1-211ENST00000477237 KIR3DL1P43629 444 aa5.75□□□□□ -1.49
XRN1-211ENST00000477237 ZDHHC14Q8IZN3 488 aa5.75□□□□□ -1.49
XRN1-211ENST00000477237 EGFL7Q9UHF1 273 aa5.75□□□□□ -1.49
XRN1-211ENST00000477237 H3BRB1 525 aa5.74□□□□□ -1.49
XRN1-211ENST00000477237 ENC1O14682 589 aa5.74□□□□□ -1.49
XRN1-211ENST00000477237 PDE6BP35913 854 aa5.74□□□□□ -1.49
XRN1-211ENST00000477237 ZNF746Q6NUN9 644 aaPredicted RBP5.74□□□□□ -1.49
XRN1-211ENST00000477237 LRFN4Q6PJG9 635 aa5.74□□□□□ -1.49
XRN1-211ENST00000477237 DACT3Q96B18 629 aaPredicted RBP5.74□□□□□ -1.49
XRN1-211ENST00000477237 TUT1Q9H6E5 874 aaKnown RBP5.74□□□□□ -1.49
XRN1-211ENST00000477237 CWC22Q9HCG8 908 aaKnown RBP5.74□□□□□ -1.49
XRN1-211ENST00000477237 CARNS1A5YM72 827 aa5.73□□□□□ -1.49
XRN1-211ENST00000477237 TPP2P29144 1249 aaPredicted RBP5.73□□□□□ -1.49
XRN1-211ENST00000477237 GAB4Q2WGN9 574 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms