RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 MAP3K21Q5TCX8 1036 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 DEFB123Q8N688 67 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 CLUAP1Q96AJ1 413 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 DBNDD2Q9BQY9 259 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 LRP2BPQ9P2M1 347 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 OGDHLQ9ULD0 1010 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 NAV1Q8NEY1 1877 aa14.76□□□□□ -0.05
HDAC6-219ENST00000476625 LDHCP07864 332 aa14.75□□□□□ -0.05
HDAC6-219ENST00000476625 BACE1P56817 501 aa14.75□□□□□ -0.05
HDAC6-219ENST00000476625 GSTO1P78417 241 aa14.75□□□□□ -0.05
HDAC6-219ENST00000476625 MDM2Q00987 491 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-219ENST00000476625 ANKLE1Q8NAG6 615 aa14.75□□□□□ -0.05
HDAC6-219ENST00000476625 PIH1D3Q9NQM4 214 aaKnown RBP14.75□□□□□ -0.05
HDAC6-219ENST00000476625 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
HDAC6-219ENST00000476625 TLR7Q9NYK1 1049 aaKnown RBP14.75□□□□□ -0.05
HDAC6-219ENST00000476625 FLRT1Q9NZU1 646 aa14.75□□□□□ -0.05
HDAC6-219ENST00000476625 BCAR3O75815 825 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 CNMDO75829 334 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 CYP2E1P05181 493 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-219ENST00000476625 BMP8BP34820 402 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 EVX2Q03828 476 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 PABPC4Q13310 644 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDAC6-219ENST00000476625 NAA16Q6N069 864 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-219ENST00000476625 WDR18Q9BV38 432 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 C1orf115Q9H7X2 142 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 AS3MTQ9HBK9 375 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 TMOD4Q9NZQ9 345 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 ZBTB21Q9ULJ3 1066 aa14.74□□□□□ -0.05
HDAC6-219ENST00000476625 GNAI3P08754 354 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 TRIM27P14373 513 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 ZKSCAN1P17029 563 aaPredicted RBP14.73□□□□□ -0.05
HDAC6-219ENST00000476625 ZAP70P43403 619 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 ERVK-9P63128 1117 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 ERVK-24P63145 666 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 TTC39AQ5SRH9 613 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 LHX8Q68G74 356 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 GPR142Q7Z601 462 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 CRACR2BQ8N4Y2 399 aaPredicted RBP14.73□□□□□ -0.05
HDAC6-219ENST00000476625 GPRC5AQ8NFJ5 357 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 USP6NLQ92738 828 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 FRAT1Q92837 279 aaPredicted RBP14.73□□□□□ -0.05
HDAC6-219ENST00000476625 NUDT12Q9BQG2 462 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 UBE2OQ9C0C9 1292 aaKnown RBP14.73□□□□□ -0.05
HDAC6-219ENST00000476625 PI4KBQ9UBF8 816 aa14.73□□□□□ -0.05
HDAC6-219ENST00000476625 HERC5Q9UII4 1024 aaKnown RBP14.73□□□□□ -0.05
HDAC6-219ENST00000476625 COL6A1P12109 1028 aa14.72□□□□□ -0.05
HDAC6-219ENST00000476625 HOXA7P31268 230 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-219ENST00000476625 MORN1Q5T089 497 aa14.72□□□□□ -0.05
HDAC6-219ENST00000476625 TDHQ8IZJ6 230 aa14.72□□□□□ -0.05
HDAC6-219ENST00000476625 MIGA1Q8NAN2 632 aa14.72□□□□□ -0.05
HDAC6-219ENST00000476625 FAM161BQ96MY7 647 aa14.72□□□□□ -0.05
HDAC6-219ENST00000476625 MTMR10Q9NXD2 777 aa14.72□□□□□ -0.05
HDAC6-219ENST00000476625 RLFQ13129 1914 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 USP17L10C9JJH3 530 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 GH2P01242 217 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 ASNSP08243 561 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 G3BP1Q13283 466 aaKnown RBP eCLIP14.71□□□□□ -0.058e-6■□□□□ 9
HDAC6-219ENST00000476625 TNNI3KQ59H18 835 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 TMEM57Q8N5G2 664 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 NOL10Q9BSC4 688 aaKnown RBP14.71□□□□□ -0.05
HDAC6-219ENST00000476625 TBC1D2Q9BYX2 928 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 FPGT-TNNI3KV9GXZ4 949 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 A0A0G2JMZ2 1700 aa14.71□□□□□ -0.05
HDAC6-219ENST00000476625 GNAI2P04899 355 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 UQCRFS1P1P0C7P4 283 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 LRIT3Q3SXY7 679 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 WDR78Q5VTH9 848 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 METTL16Q86W50 562 aaKnown RBP14.7□□□□□ -0.06
HDAC6-219ENST00000476625 TRPV1Q8NER1 839 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 BTBD7Q9P203 1132 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 PARP14Q460N5 1801 aa14.7□□□□□ -0.06
HDAC6-219ENST00000476625 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-219ENST00000476625 MYH8P13535 1937 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 ATN1P54259 1190 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-219ENST00000476625 PPP4CP60510 307 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 PDE3AQ14432 1141 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 ANO1Q5XXA6 986 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 PLEKHH3Q7Z736 793 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 NPLOC4Q8TAT6 608 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 SOCS4Q8WXH5 440 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 APBA2Q99767 749 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 TRIM34Q9BYJ4 488 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 CCDC8Q9H0W5 538 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-219ENST00000476625 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
HDAC6-219ENST00000476625 ANTXR1Q9H6X2 564 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 DBNLQ9UJU6 430 aaKnown RBP14.69□□□□□ -0.06
HDAC6-219ENST00000476625 HDAC5Q9UQL6 1122 aa14.69□□□□□ -0.06
HDAC6-219ENST00000476625 C19orf81C9J6K1 198 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 BAG3O95817 575 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 MAP4K4O95819 1239 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-219ENST00000476625 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-219ENST00000476625 XRCC5P13010 732 aaKnown RBP14.68□□□□□ -0.06
HDAC6-219ENST00000476625 CYP7A1P22680 504 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 MAPK4P31152 587 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 RGS2P41220 211 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 POLA2Q14181 598 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 USP17L2Q6R6M4 530 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 ARHGAP45Q92619 1136 aa14.68□□□□□ -0.06
HDAC6-219ENST00000476625 GUCD1Q96NT3 240 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms