RNA–Protein interactions for RNA: ENST00000475960.1

RBM34-206, Transcript of RNA binding motif protein 34, human

TSL 3

Gene RBM34, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM34-206	ENST00000475960	MASTL	Q96GX5	879 aa		11.24	□□□□□ -0.61
RBM34-206	ENST00000475960	COL11A2	P13942	1736 aa	Predicted RBP	11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	TERT	O14746	1132 aa	Known RBP	11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	NDUFB5	O43674	189 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	NOG	Q13253	232 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	CST9	Q5W186	159 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	CIAPIN1	Q6FI81	312 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	SAPCD2	Q86UD0	394 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	RGL4	Q8IZJ4	473 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	GPR152	Q8TDT2	470 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	EDEM1	Q92611	657 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	BRPF3	Q9ULD4	1205 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960	ZBTB1	Q9Y2K1	713 aa		11.23	□□□□□ -0.61
RBM34-206	ENST00000475960		A0A087WZG4	1122 aa		11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	FZD9	O00144	591 aa		11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	SRGN	P10124	158 aa		11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	CYP19A1	P11511	503 aa	Predicted RBP	11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	MARS	P56192	900 aa	Known RBP	11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	DNM1	Q05193	864 aa	Known RBP	11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	HABP4	Q5JVS0	413 aa	Known RBP	11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	USP50	Q70EL3	339 aa	Predicted RBP	11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	RTKN2	Q8IZC4	609 aa		11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	JDP2	Q8WYK2	163 aa		11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	DCTN4	Q9UJW0	460 aa		11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	KCNH4	Q9UQ05	1017 aa		11.22	□□□□□ -0.61
RBM34-206	ENST00000475960	GPR25	O00155	361 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	TRAF5	O00463	557 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	CELF2	O95319	508 aa	Known RBP	11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	PDGFA	P04085	211 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	VSIG8	P0DPA2	414 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	PCSK2	P16519	638 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	IARS	P41252	1262 aa	Known RBP	11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	USP5	P45974	858 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	EIF6	P56537	245 aa	Known RBP	11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	FMR1	Q06787	632 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	TBC1D9B	Q66K14	1250 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	CITED4	Q96RK1	184 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	C11orf16	Q9NQ32	467 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	SAGE1	Q9NXZ1	904 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	PODXL2	Q9NZ53	605 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	MARK1	Q9P0L2	795 aa		11.21	□□□□□ -0.61
RBM34-206	ENST00000475960	RPLP1	P05386	114 aa	Known RBP	11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	MAPK1	P28482	360 aa		11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	GRN	P28799	593 aa	Known RBP	11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	SFSWAP	Q12872	951 aa	Known RBP	11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	NEUROD1	Q13562	356 aa		11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	EIF4A2	Q14240	407 aa	Known RBP	11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	TESK2	Q96S53	571 aa		11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	POLI	Q9UNA4	740 aa		11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	ANKRD31	Q8N7Z5	1873 aa		11.2	□□□□□ -0.62
RBM34-206	ENST00000475960	FGFR3	P22607	806 aa		11.19	□□□□□ -0.62
RBM34-206	ENST00000475960	CANX	P27824	592 aa	Known RBP	11.19	□□□□□ -0.62
RBM34-206	ENST00000475960	AKAP4	Q5JQC9	854 aa		11.19	□□□□□ -0.62
RBM34-206	ENST00000475960	NPM2	Q86SE8	214 aa	Known RBP	11.19	□□□□□ -0.62
RBM34-206	ENST00000475960	CMTR1	Q8N1G2	835 aa	Known RBP	11.19	□□□□□ -0.62
RBM34-206	ENST00000475960	SETDB2	Q96T68	719 aa		11.19	□□□□□ -0.62
RBM34-206	ENST00000475960	USP20	Q9Y2K6	914 aa		11.19	□□□□□ -0.62
RBM34-206	ENST00000475960	ARFGEF2	Q9Y6D5	1785 aa		11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	NPR1	P16066	1061 aa		11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	CTU1	Q7Z7A3	348 aa	Known RBP	11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	SIN3A	Q96ST3	1273 aa		11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	RBCK1	Q9BYM8	510 aa		11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	HCN2	Q9UL51	889 aa		11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	KCNMB2	Q9Y691	235 aa		11.18	□□□□□ -0.62
RBM34-206	ENST00000475960	CASP8AP2	Q9UKL3	1982 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	SCN7A	Q01118	1682 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	SLX4	Q8IY92	1834 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	STARD3NL	O95772	234 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	CD33	P20138	364 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	GJD3	Q8N144	294 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	TTC16	Q8NEE8	873 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	ZNF408	Q9H9D4	720 aa		11.17	□□□□□ -0.62
RBM34-206	ENST00000475960	EGFR	P00533	1210 aa		11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	EPS15	P42566	896 aa		11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	MFAP1	P55081	439 aa	Known RBP	11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	NFX1	Q12986	1120 aa	Known RBP	11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	GPR161	Q8N6U8	529 aa	Known RBP	11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	IRF7	Q92985	503 aa		11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	SLC52A2	Q9HAB3	445 aa		11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	POLK	Q9UBT6	870 aa		11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	BCOR	Q6W2J9	1755 aa		11.16	□□□□□ -0.62
RBM34-206	ENST00000475960	XYLB	O75191	536 aa		11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	EIF5	P55010	431 aa	Known RBP	11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	EHHADH	Q08426	723 aa		11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	TRIP4	Q15650	581 aa	Predicted RBP	11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	PKN2	Q16513	984 aa	Known RBP	11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	SYNE4	Q8N205	404 aa		11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	PSMD1	Q99460	953 aa		11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	ADARB2	Q9NS39	739 aa	Known RBP	11.15	□□□□□ -0.62
RBM34-206	ENST00000475960	CACNA1S	Q13698	1873 aa		11.15	□□□□□ -0.63
RBM34-206	ENST00000475960	TRPM7	Q96QT4	1865 aa		11.15	□□□□□ -0.63
RBM34-206	ENST00000475960	ERBB4	Q15303	1308 aa		11.14	□□□□□ -0.63
RBM34-206	ENST00000475960	ALDH1B1	P30837	517 aa		11.14	□□□□□ -0.63
RBM34-206	ENST00000475960	HUNK	P57058	714 aa		11.14	□□□□□ -0.63
RBM34-206	ENST00000475960	SPEM2	Q0P670	501 aa		11.14	□□□□□ -0.63
RBM34-206	ENST00000475960	CCIN	Q13939	588 aa		11.14	□□□□□ -0.63
RBM34-206	ENST00000475960	GAS6	Q14393	721 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms