RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 GJD2Q9UKL4 321 aa13.26□□□□□ -0.29
CDRT1-205ENST00000475944 FOCADQ5VW36 1801 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 ZAP70P43403 619 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 ADGRA1Q86SQ6 560 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 CERS3Q8IU89 383 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
CDRT1-205ENST00000475944 SOCS4Q8WXH5 440 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 DNAJC18Q9H819 358 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 PALD1Q9ULE6 856 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
CDRT1-205ENST00000475944 DOCK3Q8IZD9 2030 aa13.24□□□□□ -0.29
CDRT1-205ENST00000475944 GDF11O95390 407 aa13.24□□□□□ -0.29
CDRT1-205ENST00000475944 HERVK_113P62684 666 aa13.24□□□□□ -0.29
CDRT1-205ENST00000475944 GPRC5AQ8NFJ5 357 aa13.24□□□□□ -0.29
CDRT1-205ENST00000475944 GTF3C2Q8WUA4 911 aaPredicted RBP13.24□□□□□ -0.29
CDRT1-205ENST00000475944 P2RX7Q99572 595 aaKnown RBP13.24□□□□□ -0.29
CDRT1-205ENST00000475944 NUDT12Q9BQG2 462 aa13.24□□□□□ -0.29
CDRT1-205ENST00000475944 NOP58Q9Y2X3 529 aaKnown RBP13.24□□□□□ -0.29
CDRT1-205ENST00000475944 CDK5RAP2Q96SN8 1893 aa13.24□□□□□ -0.29
CDRT1-205ENST00000475944 CEP290O15078 2479 aa13.24□□□□□ -0.29
CDRT1-205ENST00000475944 IDH1O75874 414 aaKnown RBP13.23□□□□□ -0.29
CDRT1-205ENST00000475944 CYP7A1P22680 504 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 MAPK4P31152 587 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 JAG1P78504 1218 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 ITPRIPQ8IWB1 547 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 CCAR1Q8IX12 1150 aaKnown RBP13.23□□□□□ -0.29
CDRT1-205ENST00000475944 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
CDRT1-205ENST00000475944 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
CDRT1-205ENST00000475944 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 PIH1D3Q9NQM4 214 aaKnown RBP13.23□□□□□ -0.29
CDRT1-205ENST00000475944 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
CDRT1-205ENST00000475944 DBNLQ9UJU6 430 aaKnown RBP13.23□□□□□ -0.29
CDRT1-205ENST00000475944 TRIOBPQ9H2D6 2365 aa13.23□□□□□ -0.29
CDRT1-205ENST00000475944 XRCC5P13010 732 aaKnown RBP13.22□□□□□ -0.29
CDRT1-205ENST00000475944 CYP2B6P20813 491 aa13.22□□□□□ -0.29
CDRT1-205ENST00000475944 DYNLL1P63167 89 aaKnown RBP13.22□□□□□ -0.29
CDRT1-205ENST00000475944 TRIM32Q13049 653 aa13.22□□□□□ -0.29
CDRT1-205ENST00000475944 SHROOM1Q2M3G4 852 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-205ENST00000475944 TMED8Q6PL24 325 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-205ENST00000475944 USP17L2Q6R6M4 530 aa13.22□□□□□ -0.29
CDRT1-205ENST00000475944 TRIB2Q92519 343 aa13.22□□□□□ -0.29
CDRT1-205ENST00000475944 CCDC8Q9H0W5 538 aaPredicted RBP13.22□□□□□ -0.29
CDRT1-205ENST00000475944 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
CDRT1-205ENST00000475944 PLXNB2O15031 1838 aa13.22□□□□□ -0.29
CDRT1-205ENST00000475944 MYO5AQ9Y4I1 1855 aaKnown RBP13.21□□□□□ -0.29
CDRT1-205ENST00000475944 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.29
CDRT1-205ENST00000475944 USP5P45974 858 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 ERVK-9P63128 1117 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 ERVK-24P63145 666 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 C7orf61Q8IZ16 206 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 MIGA1Q8NAN2 632 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 FEZ1Q99689 392 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 PAGR1Q9BTK6 254 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 C11orf49Q9H6J7 331 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 TLR7Q9NYK1 1049 aaKnown RBP13.21□□□□□ -0.29
CDRT1-205ENST00000475944 RBPJLQ9UBG7 517 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 OGDHLQ9ULD0 1010 aa13.21□□□□□ -0.29
CDRT1-205ENST00000475944 GH2P01242 217 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
CDRT1-205ENST00000475944 RGS2P41220 211 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 MAP3K12Q12852 859 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 GPR142Q7Z601 462 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 TTC6Q86TZ1 520 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 ERC1Q8IUD2 1116 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 EAF2Q96CJ1 260 aaPredicted RBP13.2□□□□□ -0.3
CDRT1-205ENST00000475944 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 EHD4Q9H223 541 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
CDRT1-205ENST00000475944 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
CDRT1-205ENST00000475944 MYH1P12882 1939 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
CDRT1-205ENST00000475944 PEX10O60683 326 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 BMP8BP34820 402 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 USP14P54578 494 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 CCNA1P78396 465 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
CDRT1-205ENST00000475944 Q3C1V9 767 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 APBA2Q99767 749 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 GDF15Q99988 308 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 PORCNQ9H237 461 aa13.19□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 GLRX3O76003 335 aaKnown RBP13.18□□□□□ -0.3
CDRT1-205ENST00000475944 RLBP1P12271 317 aa13.18□□□□□ -0.3
CDRT1-205ENST00000475944 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms