RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 PDE4DIPQ5VU43 2346 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 CCDC171Q6TFL3 1326 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 USP17L12C9JPN9 530 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 USP17L21D6R901 530 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 CAP2P40123 477 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 TDO2P48775 406 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 PLCD1P51178 756 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 PPATQ06203 517 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 PKN2Q16513 984 aaKnown RBP18.07■□□□□ 0.48
SNX13-207ENST00000475800 BMP2KLQ5H9B9 411 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 C12orf60Q5U649 245 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 TBC1D2Q9BYX2 928 aa18.07■□□□□ 0.48
SNX13-207ENST00000475800 RAD50Q92878 1312 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 FAM196BA6NMK8 535 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 INHBEP58166 350 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 GABPAQ06546 454 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 PPIL2Q13356 520 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 SLC4A8Q2Y0W8 1093 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 CTR9Q6PD62 1173 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 FBXO46Q6PJ61 603 aaPredicted RBP18.06■□□□□ 0.48
SNX13-207ENST00000475800 CWC27Q6UX04 472 aaKnown RBP18.06■□□□□ 0.48
SNX13-207ENST00000475800 IFNL3Q8IZI9 196 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 NAPBQ9H115 298 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 DNAJC18Q9H819 358 aa18.06■□□□□ 0.48
SNX13-207ENST00000475800 ASNSP08243 561 aa18.05■□□□□ 0.48
SNX13-207ENST00000475800 CRHR2Q13324 411 aa18.05■□□□□ 0.48
SNX13-207ENST00000475800 ALX1Q15699 326 aa18.05■□□□□ 0.48
SNX13-207ENST00000475800 TATDN1Q6P1N9 297 aa18.05■□□□□ 0.48
SNX13-207ENST00000475800 CCDC129Q6ZRS4 1044 aa18.05■□□□□ 0.48
SNX13-207ENST00000475800 OTUD5Q96G74 571 aa18.05■□□□□ 0.48
SNX13-207ENST00000475800 EPB41L4AQ9HCS5 686 aaPredicted RBP18.05■□□□□ 0.48
SNX13-207ENST00000475800 PHIPQ8WWQ0 1821 aa18.05■□□□□ 0.48
SNX13-207ENST00000475800 ZMYM6O95789 1325 aa18.04■□□□□ 0.48
SNX13-207ENST00000475800 GTF2A2P52657 109 aa18.04■□□□□ 0.48
SNX13-207ENST00000475800 CD99L2Q8TCZ2 262 aa18.04■□□□□ 0.48
SNX13-207ENST00000475800 ZNF287Q9HBT7 754 aa18.04■□□□□ 0.48
SNX13-207ENST00000475800 ROBO3Q96MS0 1386 aa18.04■□□□□ 0.48
SNX13-207ENST00000475800 ECM2O94769 699 aaPredicted RBP18.03■□□□□ 0.48
SNX13-207ENST00000475800 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
SNX13-207ENST00000475800 SLURP2P0DP57 97 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 CYP2D6P10635 497 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 PTPRAP18433 802 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 CHMLP26374 656 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 CERKLQ49MI3 558 aaPredicted RBP18.03■□□□□ 0.48
SNX13-207ENST00000475800 C16orf86Q6ZW13 317 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 ZNF589Q86UQ0 364 aaPredicted RBP18.03■□□□□ 0.48
SNX13-207ENST00000475800 PTPN18Q99952 460 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 AS3MTQ9HBK9 375 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 PTPRFP10586 1907 aa18.03■□□□□ 0.48
SNX13-207ENST00000475800 USP17L5A8MUK1 530 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 CXCL11O14625 94 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 HSPD1P10809 573 aaKnown RBP18.02■□□□□ 0.48
SNX13-207ENST00000475800 SHMT1P34896 483 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 SNAPC2Q13487 334 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 NOM1Q5C9Z4 860 aaKnown RBP18.02■□□□□ 0.48
SNX13-207ENST00000475800 OTUD7BQ6GQQ9 843 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 OTOP1Q7RTM1 612 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 CCDC17Q96LX7 622 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 KCNH4Q9UQ05 1017 aa18.02■□□□□ 0.48
SNX13-207ENST00000475800 CYP2D7A0A087X1C5 515 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 IRF6O14896 467 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 CETPP11597 493 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 CDK8P49336 464 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 VPS53Q5VIR6 699 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 CFHR5Q9BXR6 569 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 ZBTB21Q9ULJ3 1066 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 ZHX2Q9Y6X8 837 aa18.01■□□□□ 0.47
SNX13-207ENST00000475800 CCL15-CCL14A0A0B4J2E2 113 aa18■□□□□ 0.47
SNX13-207ENST00000475800 TESPA1A2RU30 521 aaPredicted RBP18■□□□□ 0.47
SNX13-207ENST00000475800 FOXP2O15409 715 aa18■□□□□ 0.47
SNX13-207ENST00000475800 PDE4BQ07343 736 aa18■□□□□ 0.47
SNX13-207ENST00000475800 PPARAQ07869 468 aa18■□□□□ 0.47
SNX13-207ENST00000475800 RRP1BQ14684 758 aaKnown RBP18■□□□□ 0.47
SNX13-207ENST00000475800 CCL15Q16663 113 aa18■□□□□ 0.47
SNX13-207ENST00000475800 ABCB5Q2M3G0 1257 aa18■□□□□ 0.47
SNX13-207ENST00000475800 CASC1Q6TDU7 716 aa18■□□□□ 0.47
SNX13-207ENST00000475800 SKAP1Q86WV1 359 aa18■□□□□ 0.47
SNX13-207ENST00000475800 DYNLL2Q96FJ2 89 aa18■□□□□ 0.47
SNX13-207ENST00000475800 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
SNX13-207ENST00000475800 GDF11O95390 407 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 SLC34A2O95436 690 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 GH2P01242 217 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 CAP1Q01518 475 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 BRI3BPQ8WY22 251 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 MS4A4AQ96JQ5 239 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 MKNK2Q9HBH9 465 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 AFG3L2Q9Y4W6 797 aa17.99■□□□□ 0.47
SNX13-207ENST00000475800 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 SGSM2O43147 1006 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 MYCP01106 439 aaPredicted RBP17.98■□□□□ 0.47
SNX13-207ENST00000475800 FGAP02671 866 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 SP3Q02447 781 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 EVX2Q03828 476 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 TAF1CQ15572 869 aaPredicted RBP17.98■□□□□ 0.47
SNX13-207ENST00000475800 TMEM179Q6ZVK1 233 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 SLC44A5Q8NCS7 719 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms