RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 VPS72Q15906 364 aa6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 SV2CQ496J9 727 aa6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 RAB44Q7Z6P3 723 aaPredicted RBP6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 ADAM19Q9H013 955 aa6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 ARHGEF4Q9NR80 690 aa6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 ZNF214Q9UL59 606 aaPredicted RBP6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 PCDHA4Q9UN74 947 aa6.58□□□□□ -1.36
SRGAP3-205ENST00000475560 FAM83GA6ND36 823 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 DNAJA2O60884 412 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 NPTXRO95502 500 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 PLCG1P19174 1290 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 PAX3P23760 479 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 ITKQ08881 620 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 STRN3Q13033 797 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 MAP7Q14244 749 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 HSP90AA2PQ14568 343 aaPredicted RBP6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 INPP5AQ14642 412 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 PKDCCQ504Y2 493 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 YOD1Q5VVQ6 348 aaPredicted RBP6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 RNF219Q5W0B1 726 aaPredicted RBP6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 PASD1Q8IV76 773 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 PPM1KQ8N3J5 372 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 ZNF700Q9H0M5 742 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 CCDC8Q9H0W5 538 aaPredicted RBP6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 CDH19Q9H159 772 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 DACH1Q9UI36 760 aa6.57□□□□□ -1.36
SRGAP3-205ENST00000475560 E2F8A0AVK6 867 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 BNIP3LO60238 219 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 SH3BP5O60239 455 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 ZNF143P52747 638 aaPredicted RBP6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 AP3B2Q13367 1082 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 SAFB2Q14151 953 aaKnown RBP eCLIP6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 BRD3Q15059 726 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 TMEM201Q5SNT2 666 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 LHFPL2Q6ZUX7 228 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 TCEAL8Q8IYN2 117 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 ZNF775Q96BV0 537 aaPredicted RBP6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 HOOK2Q96ED9 719 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 NDFIP2Q9NV92 336 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 BSDC1Q9NW68 430 aaPredicted RBP6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 TACC3Q9Y6A5 838 aa6.56□□□□□ -1.36
SRGAP3-205ENST00000475560 HMGB1P1B2RPK0 211 aaPredicted RBP6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 GPR39O43194 453 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 DNAJC8O75937 253 aaPredicted RBP6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 PTPRAP18433 802 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 POU3F2P20265 443 aaPredicted RBP6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 PIN1Q13526 163 aaPredicted RBP6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 NEUROD1Q13562 356 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 PCBP1Q15365 356 aaKnown RBP eCLIP6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 PCSK7Q16549 785 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 LONRF3Q496Y0 759 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 LRFN4Q6PJG9 635 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 KSR2Q6VAB6 950 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 HDXQ7Z353 690 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 C11orf96Q7Z7L8 435 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 PLPPR2Q96GM1 343 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 CAMKK2Q96RR4 588 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 SMAD5Q99717 465 aaKnown RBP6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 AARSD1Q9BTE6 412 aaKnown RBP6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 IGFLR1Q9H665 355 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 AASDHPPTQ9NRN7 309 aa6.55□□□□□ -1.36
SRGAP3-205ENST00000475560 CHURC1-FNTBB4DL54 471 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 SOX1O00570 391 aaPredicted RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 BRINP1O60477 761 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 PDE4BQ07343 736 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 SCARF1Q14162 830 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 IKBKEQ14164 716 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 DHX8Q14562 1220 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 STAT4Q14765 748 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 MLC1Q15049 377 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 DHCR24Q15392 516 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 FAM102BQ5T8I3 360 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 NXNQ6DKJ4 435 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 RIPOR1Q6ZS17 1223 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 CHMP4CQ96CF2 233 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 MTMR8Q96EF0 704 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 YIPF4Q9BSR8 244 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 RTFDC1Q9BY42 306 aaPredicted RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 ZC3H12CQ9C0D7 883 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 MTFR1LQ9H019 292 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 MAF1Q9H063 256 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 PUS7LQ9H0K6 701 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 NUCKS1Q9H1E3 243 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 SH2B1Q9NRF2 756 aaPredicted RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 ENAMQ9NRM1 1142 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 DNAJB12Q9NXW2 375 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 SUSD2Q9UGT4 822 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 NOB1Q9ULX3 412 aaKnown RBP6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 SPEF1Q9Y4P9 236 aa6.54□□□□□ -1.36
SRGAP3-205ENST00000475560 SENP3-EIF4A1A0A087X0R7 540 aa6.53□□□□□ -1.36
SRGAP3-205ENST00000475560 ANKRD34BA5PLL1 514 aa6.53□□□□□ -1.36
SRGAP3-205ENST00000475560 GOLGA6CA6NDK9 693 aa6.53□□□□□ -1.36
SRGAP3-205ENST00000475560 GOLGA6BA6NDN3 693 aa6.53□□□□□ -1.36
SRGAP3-205ENST00000475560 FAM187AA6NFU0 413 aa6.53□□□□□ -1.36
SRGAP3-205ENST00000475560 IFRD1O00458 451 aaPredicted RBP6.53□□□□□ -1.36
SRGAP3-205ENST00000475560 GOLGA6DP0CG33 693 aa6.53□□□□□ -1.36
SRGAP3-205ENST00000475560 NAT2P11245 290 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms