RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PRAMEF13Q5VWM6 474 aa10.76□□□□□ -0.69
SMC5-203ENST00000475540 GRIN3BO60391 1043 aa10.75□□□□□ -0.69
SMC5-203ENST00000475540 SPINK2P20155 84 aa10.75□□□□□ -0.69
SMC5-203ENST00000475540 XAGE3Q8WTP9 111 aa10.75□□□□□ -0.69
SMC5-203ENST00000475540 ACSF2Q96CM8 615 aaPredicted RBP10.75□□□□□ -0.69
SMC5-203ENST00000475540 MIPEPQ99797 713 aa10.75□□□□□ -0.69
SMC5-203ENST00000475540 SPON2Q9BUD6 331 aa10.75□□□□□ -0.69
SMC5-203ENST00000475540 MKNK2Q9HBH9 465 aa10.75□□□□□ -0.69
SMC5-203ENST00000475540 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
SMC5-203ENST00000475540 PRR36Q9H6K5 1346 aa10.75□□□□□ -0.69
SMC5-203ENST00000475540 SLITRK5O94991 958 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 ZNF394Q53GI3 561 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 TMEM201Q5SNT2 666 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 FAM214BQ7L5A3 538 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 KIAA0825Q8IV33 1275 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 FAM181AQ8N9Y4 354 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 NT5C1AQ9BXI3 368 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 LRRC3Q9BY71 257 aa10.74□□□□□ -0.69
SMC5-203ENST00000475540 TPX2Q9ULW0 747 aaKnown RBP10.74□□□□□ -0.69
SMC5-203ENST00000475540 POLR3KQ9Y2Y1 108 aaPredicted RBP10.74□□□□□ -0.69
SMC5-203ENST00000475540 IGF2BP3O00425 579 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMC5-203ENST00000475540 EOMESO95936 686 aa10.73□□□□□ -0.69
SMC5-203ENST00000475540 WNT11O96014 354 aa10.73□□□□□ -0.69
SMC5-203ENST00000475540 YARSP54577 528 aaKnown RBP10.73□□□□□ -0.69
SMC5-203ENST00000475540 APOBRQ0VD83 1088 aa10.73□□□□□ -0.69
SMC5-203ENST00000475540 LETMD1Q6P1Q0 360 aa10.73□□□□□ -0.69
SMC5-203ENST00000475540 NETO1Q8TDF5 533 aa10.73□□□□□ -0.69
SMC5-203ENST00000475540 HEXIM2Q96MH2 286 aaKnown RBP10.73□□□□□ -0.69
SMC5-203ENST00000475540 DPH2Q9BQC3 489 aaPredicted RBP10.73□□□□□ -0.69
SMC5-203ENST00000475540 PRDM5Q9NQX1 630 aaPredicted RBP10.73□□□□□ -0.69
SMC5-203ENST00000475540 UBP1Q9NZI7 540 aa10.73□□□□□ -0.69
SMC5-203ENST00000475540 REV1Q9UBZ9 1251 aa10.73□□□□□ -0.69
SMC5-203ENST00000475540 HTR3BO95264 441 aa10.72□□□□□ -0.69
SMC5-203ENST00000475540 MLECQ14165 292 aa10.72□□□□□ -0.69
SMC5-203ENST00000475540 ZNF746Q6NUN9 644 aaPredicted RBP10.72□□□□□ -0.69
SMC5-203ENST00000475540 FAM13CQ8NE31 585 aa10.72□□□□□ -0.69
SMC5-203ENST00000475540 NKD1Q969G9 470 aa10.72□□□□□ -0.69
SMC5-203ENST00000475540 BRMS1Q9HCU9 246 aa10.72□□□□□ -0.69
SMC5-203ENST00000475540 ANGEL1Q9UNK9 670 aaKnown RBP10.72□□□□□ -0.69
SMC5-203ENST00000475540 PCDHGB7Q9Y5F8 929 aa10.72□□□□□ -0.69
SMC5-203ENST00000475540 CRKP46108 304 aa10.71□□□□□ -0.69
SMC5-203ENST00000475540 OXCT1P55809 520 aa10.71□□□□□ -0.69
SMC5-203ENST00000475540 SEZ6Q53EL9 994 aa10.71□□□□□ -0.69
SMC5-203ENST00000475540 RIN3Q8TB24 985 aa10.71□□□□□ -0.69
SMC5-203ENST00000475540 DDX41Q9UJV9 622 aaKnown RBP10.71□□□□□ -0.69
SMC5-203ENST00000475540 GNAT3A8MTJ3 354 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 UPK3BL1B0FP48 263 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 UPK3BL2E5RIL1 263 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 CYP7A1P22680 504 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 MCM4P33991 863 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 ZNF654Q8IZM8 581 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 PLD6Q8N2A8 252 aaKnown RBP10.7□□□□□ -0.7
SMC5-203ENST00000475540 EAF1Q96JC9 268 aaPredicted RBP10.7□□□□□ -0.7
SMC5-203ENST00000475540 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 MAPK8IP1Q9UQF2 711 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 PCDHB14Q9Y5E9 798 aa10.7□□□□□ -0.7
SMC5-203ENST00000475540 PRNPP04156 253 aa10.69□□□□□ -0.7
SMC5-203ENST00000475540 CEACAM5P06731 702 aa10.69□□□□□ -0.7
SMC5-203ENST00000475540 RACK1P63244 317 aaKnown RBP10.69□□□□□ -0.7
SMC5-203ENST00000475540 IFI16Q16666 785 aaKnown RBP10.69□□□□□ -0.7
SMC5-203ENST00000475540 SFRP5Q5T4F7 317 aa10.69□□□□□ -0.7
SMC5-203ENST00000475540 CDH24Q86UP0 819 aa10.69□□□□□ -0.7
SMC5-203ENST00000475540 METTL16Q86W50 562 aaKnown RBP10.69□□□□□ -0.7
SMC5-203ENST00000475540 KRTAP4-8Q9BYQ9 185 aa10.69□□□□□ -0.7
SMC5-203ENST00000475540 KLHL3Q9UH77 587 aa10.69□□□□□ -0.7
SMC5-203ENST00000475540 ITIH2P19823 946 aa10.68□□□□□ -0.7
SMC5-203ENST00000475540 ZNF165P49910 485 aa10.68□□□□□ -0.7
SMC5-203ENST00000475540 HDLBPQ00341 1268 aaKnown RBP10.68□□□□□ -0.7
SMC5-203ENST00000475540 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
SMC5-203ENST00000475540 VSIG10LQ86VR7 867 aa10.68□□□□□ -0.7
SMC5-203ENST00000475540 SLITRK4Q8IW52 837 aa10.68□□□□□ -0.7
SMC5-203ENST00000475540 MISP3Q96FF7 219 aa10.68□□□□□ -0.7
SMC5-203ENST00000475540 TMEM265A0A087WTH1 108 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 CHURC1-FNTBB4DL54 471 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 ATE1O95260 518 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 SLFN12Q8IYM2 578 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 STK11IPQ8N1F8 1099 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 REXO1Q8N1G1 1221 aaKnown RBP10.67□□□□□ -0.7
SMC5-203ENST00000475540 ZNF428Q96B54 188 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 U3KQE9 123 aa10.67□□□□□ -0.7
SMC5-203ENST00000475540 ADAMTS4O75173 837 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 ETV3P41162 512 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 RBM25P49756 843 aaKnown RBP10.66□□□□□ -0.7
SMC5-203ENST00000475540 GK5Q6ZS86 529 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 CYB5D2Q8WUJ1 264 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 COX4I2Q96KJ9 171 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 EHMT1Q9H9B1 1298 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 PLAGL2Q9UPG8 496 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 SLC5A6Q9Y289 635 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 SNX11Q9Y5W9 270 aa10.66□□□□□ -0.7
SMC5-203ENST00000475540 GP2P55259 537 aaKnown RBP10.65□□□□□ -0.7
SMC5-203ENST00000475540 FBXL18Q96ME1 805 aa10.65□□□□□ -0.7
SMC5-203ENST00000475540 CNTNAP4Q9C0A0 1308 aa10.64□□□□□ -0.71
SMC5-203ENST00000475540 FAM155AB1AL88 458 aaPredicted RBP10.64□□□□□ -0.71
SMC5-203ENST00000475540 CBX7O95931 251 aa10.64□□□□□ -0.71
SMC5-203ENST00000475540 PRKCQQ04759 706 aa10.64□□□□□ -0.71
SMC5-203ENST00000475540 CLCQ05315 142 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms