RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 GJD2Q9UKL4 321 aa30.49■■■□□ 2.47
TMEM54-205ENST00000475208 PALD1Q9ULE6 856 aa30.49■■■□□ 2.47
TMEM54-205ENST00000475208 EVI5O60447 810 aa30.48■■■□□ 2.47
TMEM54-205ENST00000475208 GDF11O95390 407 aa30.48■■■□□ 2.47
TMEM54-205ENST00000475208 PRO3102Q9H379 93 aa30.48■■■□□ 2.47
TMEM54-205ENST00000475208 SAP30BPQ9UHR5 308 aaKnown RBP30.48■■■□□ 2.47
TMEM54-205ENST00000475208 DBNLQ9UJU6 430 aaKnown RBP30.48■■■□□ 2.47
TMEM54-205ENST00000475208 IGSF3O75054 1194 aa30.47■■■□□ 2.47
TMEM54-205ENST00000475208 FTSJ3Q8IY81 847 aaKnown RBP30.47■■■□□ 2.47
TMEM54-205ENST00000475208 TLR7Q9NYK1 1049 aaKnown RBP30.47■■■□□ 2.47
TMEM54-205ENST00000475208 NOP58Q9Y2X3 529 aaKnown RBP30.47■■■□□ 2.47
TMEM54-205ENST00000475208 HOXA7P31268 230 aaPredicted RBP30.46■■■□□ 2.47
TMEM54-205ENST00000475208 PAWRQ96IZ0 340 aaKnown RBP30.46■■■□□ 2.47
TMEM54-205ENST00000475208 GINM1Q9NU53 330 aa30.46■■■□□ 2.47
TMEM54-205ENST00000475208 ZBTB21Q9ULJ3 1066 aa30.46■■■□□ 2.47
TMEM54-205ENST00000475208 C19orf81C9J6K1 198 aa30.45■■■□□ 2.47
TMEM54-205ENST00000475208 USP17L10C9JJH3 530 aa30.45■■■□□ 2.47
TMEM54-205ENST00000475208 HLA-DOAP06340 250 aa30.45■■■□□ 2.47
TMEM54-205ENST00000475208 CYP7A1P22680 504 aa30.45■■■□□ 2.47
TMEM54-205ENST00000475208 DYNLL1P63167 89 aaKnown RBP30.45■■■□□ 2.47
TMEM54-205ENST00000475208 ITPRIPQ8IWB1 547 aa30.45■■■□□ 2.47
TMEM54-205ENST00000475208 DIS3LQ8TF46 1054 aaKnown RBP30.45■■■□□ 2.47
TMEM54-205ENST00000475208 P2RX7Q99572 595 aaKnown RBP30.45■■■□□ 2.47
TMEM54-205ENST00000475208 CCDC8Q9H0W5 538 aaPredicted RBP30.45■■■□□ 2.47
TMEM54-205ENST00000475208 SZT2Q5T011 3432 aa30.45■■■□□ 2.46
TMEM54-205ENST00000475208 PLXNB2O15031 1838 aa30.45■■■□□ 2.46
TMEM54-205ENST00000475208 PEX10O60683 326 aa30.44■■■□□ 2.46
TMEM54-205ENST00000475208 HERVK_113P62684 666 aa30.44■■■□□ 2.46
TMEM54-205ENST00000475208 TRIM32Q13049 653 aa30.44■■■□□ 2.46
TMEM54-205ENST00000475208 NECAB2Q7Z6G3 386 aa30.43■■■□□ 2.46
TMEM54-205ENST00000475208 EAF2Q96CJ1 260 aaPredicted RBP30.43■■■□□ 2.46
TMEM54-205ENST00000475208 TXNRD2Q9NNW7 524 aa30.43■■■□□ 2.46
TMEM54-205ENST00000475208 HMX1Q9NP08 348 aaPredicted RBP30.43■■■□□ 2.46
TMEM54-205ENST00000475208 RPTORQ8N122 1335 aa30.43■■■□□ 2.46
TMEM54-205ENST00000475208 IDH1O75874 414 aaKnown RBP30.42■■■□□ 2.46
TMEM54-205ENST00000475208 RLBP1P12271 317 aa30.42■■■□□ 2.46
TMEM54-205ENST00000475208 GPRC5AQ8NFJ5 357 aa30.42■■■□□ 2.46
TMEM54-205ENST00000475208 TRIB2Q92519 343 aa30.42■■■□□ 2.46
TMEM54-205ENST00000475208 CYP2B6P20813 491 aa30.41■■■□□ 2.46
TMEM54-205ENST00000475208 ANKLE1Q8NAG6 615 aa30.41■■■□□ 2.46
TMEM54-205ENST00000475208 MIGA1Q8NAN2 632 aa30.41■■■□□ 2.46
TMEM54-205ENST00000475208 ALPK3Q96L96 1907 aa30.41■■■□□ 2.46
TMEM54-205ENST00000475208 SOCS4Q8WXH5 440 aa30.4■■■□□ 2.46
TMEM54-205ENST00000475208 USP5P45974 858 aa30.39■■■□□ 2.46
TMEM54-205ENST00000475208 NUDT12Q9BQG2 462 aa30.39■■■□□ 2.46
TMEM54-205ENST00000475208 NDUFB9Q9Y6M9 179 aa30.39■■■□□ 2.46
TMEM54-205ENST00000475208 GH2P01242 217 aa30.38■■■□□ 2.45
TMEM54-205ENST00000475208 USP17L2Q6R6M4 530 aa30.38■■■□□ 2.45
TMEM54-205ENST00000475208 CERS3Q8IU89 383 aa30.38■■■□□ 2.45
TMEM54-205ENST00000475208 MAGEB6Q8N7X4 407 aa30.38■■■□□ 2.45
TMEM54-205ENST00000475208 EMILIN3Q9NT22 766 aa30.38■■■□□ 2.45
TMEM54-205ENST00000475208 RBPJLQ9UBG7 517 aa30.38■■■□□ 2.45
TMEM54-205ENST00000475208 MYH1P12882 1939 aa30.37■■■□□ 2.45
TMEM54-205ENST00000475208 ERVK-9P63128 1117 aa30.37■■■□□ 2.45
TMEM54-205ENST00000475208 ERVK-24P63145 666 aa30.37■■■□□ 2.45
TMEM54-205ENST00000475208 HNRNPUQ00839 825 aaKnown RBP eCLIP30.37■■■□□ 2.45
TMEM54-205ENST00000475208 PDE3AQ14432 1141 aa30.37■■■□□ 2.45
TMEM54-205ENST00000475208 GTF3C2Q8WUA4 911 aaPredicted RBP30.37■■■□□ 2.45
TMEM54-205ENST00000475208 PAGR1Q9BTK6 254 aa30.37■■■□□ 2.45
TMEM54-205ENST00000475208 A0A1W2PPC1 479 aa30.36■■■□□ 2.45
TMEM54-205ENST00000475208 PRKAR2AP13861 404 aaKnown RBP30.36■■■□□ 2.45
TMEM54-205ENST00000475208 MAPK4P31152 587 aa30.36■■■□□ 2.45
TMEM54-205ENST00000475208 CEP85Q6P2H3 762 aa30.36■■■□□ 2.45
TMEM54-205ENST00000475208 ANTXR1Q9H6X2 564 aa30.36■■■□□ 2.45
TMEM54-205ENST00000475208 STAP2Q9UGK3 403 aa30.36■■■□□ 2.45
TMEM54-205ENST00000475208 XRCC5P13010 732 aaKnown RBP30.35■■■□□ 2.45
TMEM54-205ENST00000475208 Q3C1V9 767 aa30.35■■■□□ 2.45
TMEM54-205ENST00000475208 MAP3K21Q5TCX8 1036 aa30.35■■■□□ 2.45
TMEM54-205ENST00000475208 CCAR1Q8IX12 1150 aaKnown RBP30.35■■■□□ 2.45
TMEM54-205ENST00000475208 C7orf61Q8IZ16 206 aa30.35■■■□□ 2.45
TMEM54-205ENST00000475208 FEZ1Q99689 392 aa30.35■■■□□ 2.45
TMEM54-205ENST00000475208 NBPF3Q9H094 633 aa30.35■■■□□ 2.45
TMEM54-205ENST00000475208 PORCNQ9H237 461 aa30.35■■■□□ 2.45
TMEM54-205ENST00000475208 SERPINB13Q9UIV8 391 aa30.35■■■□□ 2.45
TMEM54-205ENST00000475208 DDX60LQ5H9U9 1706 aaKnown RBP30.35■■■□□ 2.45
TMEM54-205ENST00000475208 ZKSCAN1P17029 563 aaPredicted RBP30.34■■■□□ 2.45
TMEM54-205ENST00000475208 MNX1P50219 401 aaPredicted RBP30.34■■■□□ 2.45
TMEM54-205ENST00000475208 ZYXQ15942 572 aaKnown RBP30.34■■■□□ 2.45
TMEM54-205ENST00000475208 TATDN1Q6P1N9 297 aa30.34■■■□□ 2.45
TMEM54-205ENST00000475208 EHD4Q9H223 541 aa30.34■■■□□ 2.45
TMEM54-205ENST00000475208 OGDHLQ9ULD0 1010 aa30.34■■■□□ 2.45
TMEM54-205ENST00000475208 EXOC6BQ9Y2D4 811 aa30.34■■■□□ 2.45
TMEM54-205ENST00000475208 MAP3K12Q12852 859 aa30.33■■■□□ 2.45
TMEM54-205ENST00000475208 POTEEQ6S8J3 1075 aa30.33■■■□□ 2.45
TMEM54-205ENST00000475208 GPR142Q7Z601 462 aa30.33■■■□□ 2.45
TMEM54-205ENST00000475208 AACSQ86V21 672 aa30.33■■■□□ 2.45
TMEM54-205ENST00000475208 C12orf42Q96LP6 360 aa30.33■■■□□ 2.45
TMEM54-205ENST00000475208 ERC1Q8IUD2 1116 aa30.32■■■□□ 2.44
TMEM54-205ENST00000475208 TRMT44Q8IYL2 757 aaKnown RBP30.32■■■□□ 2.44
TMEM54-205ENST00000475208 USP6NLQ92738 828 aa30.32■■■□□ 2.44
TMEM54-205ENST00000475208 C11orf49Q9H6J7 331 aa30.32■■■□□ 2.44
TMEM54-205ENST00000475208 RGS2P41220 211 aa30.31■■■□□ 2.44
TMEM54-205ENST00000475208 RAB3GAP1Q15042 981 aa30.31■■■□□ 2.44
TMEM54-205ENST00000475208 TMED8Q6PL24 325 aaPredicted RBP30.31■■■□□ 2.44
TMEM54-205ENST00000475208 PLEKHH3Q7Z736 793 aa30.31■■■□□ 2.44
TMEM54-205ENST00000475208 TTC6Q86TZ1 520 aa30.31■■■□□ 2.44
TMEM54-205ENST00000475208 ZMYND8Q9ULU4 1186 aaPredicted RBP30.31■■■□□ 2.44
TMEM54-205ENST00000475208 MORN1Q5T089 497 aa30.3■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L15C9J2P7 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L13C9JLJ4 530 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms