RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 C19orf81C9J6K1 198 aa19.14■□□□□ 0.65
SRRT-209ENST00000474896 PEX10O60683 326 aa19.14■□□□□ 0.65
SRRT-209ENST00000474896 HOXA7P31268 230 aaPredicted RBP19.14■□□□□ 0.65
SRRT-209ENST00000474896 CRACR2BQ8N4Y2 399 aaPredicted RBP19.14■□□□□ 0.65
SRRT-209ENST00000474896 DNAJC18Q9H819 358 aa19.14■□□□□ 0.65
SRRT-209ENST00000474896 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
SRRT-209ENST00000474896 GDF11O95390 407 aa19.13■□□□□ 0.65
SRRT-209ENST00000474896 CYP2B6P20813 491 aa19.13■□□□□ 0.65
SRRT-209ENST00000474896 ZAP70P43403 619 aa19.13■□□□□ 0.65
SRRT-209ENST00000474896 SHROOM1Q2M3G4 852 aaPredicted RBP19.13■□□□□ 0.65
SRRT-209ENST00000474896 METTL16Q86W50 562 aaKnown RBP19.13■□□□□ 0.65
SRRT-209ENST00000474896 GPRC5AQ8NFJ5 357 aa19.13■□□□□ 0.65
SRRT-209ENST00000474896 SSH3Q8TE77 659 aa19.13■□□□□ 0.65
SRRT-209ENST00000474896 SAP30BPQ9UHR5 308 aaKnown RBP19.13■□□□□ 0.65
SRRT-209ENST00000474896 FLT1P17948 1338 aa19.13■□□□□ 0.65
SRRT-209ENST00000474896 USP17L10C9JJH3 530 aa19.12■□□□□ 0.65
SRRT-209ENST00000474896 DYNLL1P63167 89 aaKnown RBP19.12■□□□□ 0.65
SRRT-209ENST00000474896 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
SRRT-209ENST00000474896 ANKLE1Q8NAG6 615 aa19.12■□□□□ 0.65
SRRT-209ENST00000474896 ZNF512BQ96KM6 892 aaPredicted RBP19.12■□□□□ 0.65
SRRT-209ENST00000474896 TXNRD2Q9NNW7 524 aa19.12■□□□□ 0.65
SRRT-209ENST00000474896 PIH1D3Q9NQM4 214 aaKnown RBP19.12■□□□□ 0.65
SRRT-209ENST00000474896 RANBP2P49792 3224 aaKnown RBP19.12■□□□□ 0.65
SRRT-209ENST00000474896 A0A1W2PPC1 479 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 HERVK_113P62684 666 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 Q3C1V9 767 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 TRIB2Q92519 343 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 NUDT12Q9BQG2 462 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 C1orf115Q9H7X2 142 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 GINM1Q9NU53 330 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 RBPJLQ9UBG7 517 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
SRRT-209ENST00000474896 HLA-DOAP06340 250 aa19.1■□□□□ 0.65
SRRT-209ENST00000474896 CYP7A1P22680 504 aa19.1■□□□□ 0.65
SRRT-209ENST00000474896 C7orf61Q8IZ16 206 aa19.1■□□□□ 0.65
SRRT-209ENST00000474896 NBPF3Q9H094 633 aa19.1■□□□□ 0.65
SRRT-209ENST00000474896 CCDC8Q9H0W5 538 aaPredicted RBP19.1■□□□□ 0.65
SRRT-209ENST00000474896 ZBTB21Q9ULJ3 1066 aa19.1■□□□□ 0.65
SRRT-209ENST00000474896 MYO5AQ9Y4I1 1855 aaKnown RBP19.09■□□□□ 0.65
SRRT-209ENST00000474896 SOX1O00570 391 aaPredicted RBP19.09■□□□□ 0.65
SRRT-209ENST00000474896 IGSF3O75054 1194 aa19.09■□□□□ 0.65
SRRT-209ENST00000474896 MNX1P50219 401 aaPredicted RBP19.09■□□□□ 0.65
SRRT-209ENST00000474896 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
SRRT-209ENST00000474896 EMILIN3Q9NT22 766 aa19.09■□□□□ 0.65
SRRT-209ENST00000474896 ALPK3Q96L96 1907 aa19.09■□□□□ 0.65
SRRT-209ENST00000474896 PLXNB2O15031 1838 aa19.09■□□□□ 0.65
SRRT-209ENST00000474896 CDK5RAP2Q96SN8 1893 aa19.08■□□□□ 0.65
SRRT-209ENST00000474896 XRCC5P13010 732 aaKnown RBP19.08■□□□□ 0.64
SRRT-209ENST00000474896 MAPK4P31152 587 aa19.08■□□□□ 0.64
SRRT-209ENST00000474896 USP17L2Q6R6M4 530 aa19.08■□□□□ 0.64
SRRT-209ENST00000474896 C11orf49Q9H6J7 331 aa19.08■□□□□ 0.64
SRRT-209ENST00000474896 TLR7Q9NYK1 1049 aaKnown RBP19.08■□□□□ 0.64
SRRT-209ENST00000474896 DBNLQ9UJU6 430 aaKnown RBP19.08■□□□□ 0.64
SRRT-209ENST00000474896 OGDHLQ9ULD0 1010 aa19.08■□□□□ 0.64
SRRT-209ENST00000474896 ZMYND8Q9ULU4 1186 aaPredicted RBP19.08■□□□□ 0.64
SRRT-209ENST00000474896 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.64
SRRT-209ENST00000474896 IDH1O75874 414 aaKnown RBP19.07■□□□□ 0.64
SRRT-209ENST00000474896 GH2P01242 217 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 PRKAR2AP13861 404 aaKnown RBP19.07■□□□□ 0.64
SRRT-209ENST00000474896 ERVK-9P63128 1117 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 ERVK-24P63145 666 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 PDE3AQ14432 1141 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 MAP3K21Q5TCX8 1036 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 POTEEQ6S8J3 1075 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 MIGA1Q8NAN2 632 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 SOCS4Q8WXH5 440 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 EAF2Q96CJ1 260 aaPredicted RBP19.07■□□□□ 0.64
SRRT-209ENST00000474896 LRCH3Q96II8 777 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 GDF15Q99988 308 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 PORCNQ9H237 461 aa19.07■□□□□ 0.64
SRRT-209ENST00000474896 BMP8BP34820 402 aa19.06■□□□□ 0.64
SRRT-209ENST00000474896 USP5P45974 858 aa19.06■□□□□ 0.64
SRRT-209ENST00000474896 CACNB2Q08289 660 aaPredicted RBP19.06■□□□□ 0.64
SRRT-209ENST00000474896 GPR142Q7Z601 462 aa19.06■□□□□ 0.64
SRRT-209ENST00000474896 TRMT44Q8IYL2 757 aaKnown RBP19.06■□□□□ 0.64
SRRT-209ENST00000474896 GTF3C2Q8WUA4 911 aaPredicted RBP19.06■□□□□ 0.64
SRRT-209ENST00000474896 USP6NLQ92738 828 aa19.06■□□□□ 0.64
SRRT-209ENST00000474896 FOCADQ5VW36 1801 aa19.06■□□□□ 0.64
SRRT-209ENST00000474896 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
SRRT-209ENST00000474896 SYN1P17600 705 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 ZYXQ15942 572 aaKnown RBP19.05■□□□□ 0.64
SRRT-209ENST00000474896 CCL14Q16627 93 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 MORN1Q5T089 497 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 TATDN1Q6P1N9 297 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 PLEKHH3Q7Z736 793 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 ITPRIPQ8IWB1 547 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 FTSJ3Q8IY81 847 aaKnown RBP19.05■□□□□ 0.64
SRRT-209ENST00000474896 MAGEB6Q8N7X4 407 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 NDUFB9Q9Y6M9 179 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 MAST2Q6P0Q8 1798 aa19.05■□□□□ 0.64
SRRT-209ENST00000474896 RGS2P41220 211 aa19.04■□□□□ 0.64
SRRT-209ENST00000474896 CWC22Q9HCG8 908 aaKnown RBP19.04■□□□□ 0.64
SRRT-209ENST00000474896 USP17L15C9J2P7 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 USP17L13C9JLJ4 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 USP17L11C9JVI0 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 USP17L18D6R9N7 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 USP17L22D6RA61 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 USP17L17D6RBQ6 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 USP17L19D6RCP7 530 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms