RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CCP110O43303 1012 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 CTIFO43310 598 aaKnown RBP8.6□□□□□ -1.03
GPNMB-209ENST00000474157 MAP3K6O95382 1288 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 RECKO95980 971 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 CYP2C19P33261 490 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 FAM50AQ14320 339 aaKnown RBP8.6□□□□□ -1.03
GPNMB-209ENST00000474157 SPTY2D1Q68D10 685 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-209ENST00000474157 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 UNC5CLQ8IV45 518 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 NLRP2Q9NX02 1062 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 PPP1R1BQ9UD71 204 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-209ENST00000474157 VTI1BQ9UEU0 232 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 PRR12Q9ULL5 1215 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 V9GYY5 206 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-209ENST00000474157 RIMS2Q9UQ26 1411 aa8.6□□□□□ -1.03
GPNMB-209ENST00000474157 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-209ENST00000474157 C2CD2LO14523 706 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 SORBS3O60504 671 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 BMP4P12644 408 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 SOX18P35713 384 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 ZNF445P59923 1031 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 PLAURQ03405 335 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 GAS6Q14393 721 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 TEX35Q5T0J7 233 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 DHX32Q7L7V1 743 aaKnown RBP8.59□□□□□ -1.03
GPNMB-209ENST00000474157 CHMP4CQ96CF2 233 aa8.59□□□□□ -1.03
GPNMB-209ENST00000474157 ZFYVE9O95405 1425 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 H3BM21 787 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 MX2P20592 715 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 USP8P40818 1118 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 RAD51AP2Q09MP3 1159 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 GPS2Q13227 327 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-209ENST00000474157 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 BORCS6Q96GS4 357 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 FRMD6Q96NE9 622 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
GPNMB-209ENST00000474157 LATS2Q9NRM7 1088 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 FAM53CQ9NYF3 392 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 SALL4Q9UJQ4 1053 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 SMC3Q9UQE7 1217 aa8.58□□□□□ -1.04
GPNMB-209ENST00000474157 NOS1P29475 1434 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 HMGB1P1B2RPK0 211 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 IPO8O15397 1037 aaKnown RBP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 GADD45BO75293 160 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 ZRANB2O95218 330 aaKnown RBP eCLIP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 EDN3P14138 238 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 TBC1D8BQ0IIM8 1120 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 TRAF1Q13077 416 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 ZNF468Q5VIY5 522 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 NCAPG2Q86XI2 1143 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 FMNL3Q8IVF7 1028 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 FAM177A1Q8N128 213 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 FAM184AQ8NB25 1140 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 KLHL23Q8NBE8 558 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 ANKRD20A12PQ8NF67 263 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 SIN3AQ96ST3 1273 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 IGFLR1Q9H665 355 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 RRP7BPQ9NSQ0 103 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 CTNNA3Q9UI47 895 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 DDX49Q9Y6V7 483 aaKnown RBP8.57□□□□□ -1.04
GPNMB-209ENST00000474157 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
GPNMB-209ENST00000474157 ADAMTS13Q76LX8 1427 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 ADGRB3O60242 1522 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 EIF2AK4Q9P2K8 1649 aaKnown RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 HOXD8P13378 290 aaPredicted RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 EIF4BP23588 611 aaKnown RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 MAP2K2P36507 400 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 MAGEA8P43361 318 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 NRLP54845 237 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 PCBP4P57723 403 aaKnown RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 HYAL2Q12891 473 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 ZSCAN26Q16670 478 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 ZNF787Q6DD87 383 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 MCTP2Q6DN12 878 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 CAVIN1Q6NZI2 390 aaKnown RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 CLEC17AQ6ZS10 378 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 EP400NLQ6ZTU2 488 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 ARMCX6Q7L4S7 300 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 FAM9BQ8IZU0 186 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 PNISRQ8TF01 805 aaKnown RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 PIBF1Q8WXW3 757 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 ORAI2Q96SN7 254 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 OSBPL7Q9BZF2 842 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 AK5Q9Y6K8 562 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 CHD2O14647 1828 aaKnown RBP8.56□□□□□ -1.04
GPNMB-209ENST00000474157 UNC13BO14795 1591 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 ARHGEF5Q12774 1597 aa8.56□□□□□ -1.04
GPNMB-209ENST00000474157 RRBP1Q9P2E9 1410 aaKnown RBP8.55□□□□□ -1.04
GPNMB-209ENST00000474157 A0A1W2PP55 124 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 KIF4AO95239 1232 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 ACPPP15309 386 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 HNRNPH2P55795 449 aaKnown RBP8.55□□□□□ -1.04
GPNMB-209ENST00000474157 GPLD1P80108 840 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms