RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ATP2B1P20020 1258 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 TDO2P48775 406 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 SARSP49591 514 aaKnown RBP12.56□□□□□ -0.4
C9orf3-214ENST00000473778 RTN1Q16799 776 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 FAM53CQ9NYF3 392 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-214ENST00000473778 BAZ2BQ9UIF8 2168 aaKnown RBP12.56□□□□□ -0.4
C9orf3-214ENST00000473778 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
C9orf3-214ENST00000473778 ZNF18P17022 549 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 EIF5P55010 431 aaKnown RBP12.56□□□□□ -0.4
C9orf3-214ENST00000473778 ETF1P62495 437 aaKnown RBP12.56□□□□□ -0.4
C9orf3-214ENST00000473778 EVX2Q03828 476 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 WTAPQ15007 396 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 POSTNQ15063 836 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 NT5DC1Q5TFE4 455 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
C9orf3-214ENST00000473778 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 PNPLA7Q6ZV29 1317 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 KIF2AO00139 706 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 CASP1P29466 404 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 TBX2Q13207 712 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 MPHOSPH8Q99549 860 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 KRT23Q9C075 422 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 SAMSN1Q9NSI8 373 aaKnown RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 NFE2L3Q9Y4A8 694 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 CYP2D7A0A087X1C5 515 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 VWA3AA6NCI4 1184 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 H2AFXP16104 143 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 CDK11BP21127 795 aaKnown RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 SEC23AQ15436 765 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 ZNF654Q8IZM8 581 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 FANCBQ8NB91 859 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 CSRNP2Q9H175 543 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 FOXP1Q9H334 677 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
C9orf3-214ENST00000473778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.55□□□□□ -0.4
C9orf3-214ENST00000473778 CACNA1SQ13698 1873 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 ADKP55263 362 aaKnown RBP12.54□□□□□ -0.4
C9orf3-214ENST00000473778 PPARAQ07869 468 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 MORC3Q14149 939 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 PKN1Q16512 942 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 OLFM4Q6UX06 510 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 TC2NQ8N9U0 490 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 PRDM1O75626 825 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 DEXIO95424 95 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 CHRNDQ07001 517 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 TOGARAM2Q6ZUX3 1019 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 ZNF384Q8TF68 577 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 EPSTI1Q96J88 318 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 VPS54Q9P1Q0 977 aa12.54□□□□□ -0.4
C9orf3-214ENST00000473778 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 FUT2Q10981 343 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-214ENST00000473778 SPATA20Q8TB22 786 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 WDR24Q96S15 920 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 SRPRBQ9Y5M8 271 aaKnown RBP12.53□□□□□ -0.4
C9orf3-214ENST00000473778 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 TNKSO95271 1327 aa12.53□□□□□ -0.4
C9orf3-214ENST00000473778 A0A1B0GUL6 1792 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 CBFA2T2O43439 604 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 CAMTA2O94983 1202 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 NTSR2O95665 410 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 SLFN14P0C7P3 912 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.4
C9orf3-214ENST00000473778 CLCN6P51797 869 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 C3orf67Q6ZVT6 689 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 APTXQ7Z2E3 356 aaKnown RBP12.52□□□□□ -0.4
C9orf3-214ENST00000473778 ELOA2Q8IYF1 753 aaPredicted RBP12.52□□□□□ -0.4
C9orf3-214ENST00000473778 EPC1Q9H2F5 836 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 PPP2R2CQ9Y2T4 447 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 PHLPP2Q6ZVD8 1323 aa12.52□□□□□ -0.4
C9orf3-214ENST00000473778 CASZ1Q86V15 1759 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 A0A0U1RQJ8 604 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 PLEKHA8P1O95397 391 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 CYP7A1P22680 504 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 CRKLP46109 303 aaKnown RBP12.52□□□□□ -0.41
C9orf3-214ENST00000473778 GYG1P46976 350 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
C9orf3-214ENST00000473778 NPY5RQ15761 445 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 ENAHQ8N8S7 591 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-214ENST00000473778 ATRIPQ8WXE1 791 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 WASF1Q92558 559 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 ABCF2Q9UG63 623 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
C9orf3-214ENST00000473778 TEX33O43247 280 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 ITPK1Q13572 414 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 MTF1Q14872 753 aa12.51□□□□□ -0.41
C9orf3-214ENST00000473778 ARHGAP29Q52LW3 1261 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms