RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RBSNQ9H1K0 784 aa7.25□□□□□ -1.25
CLK1-210ENST00000473565 MYH6P13533 1939 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 CDKL5O76039 1030 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 ZNF445P59923 1031 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 TROAPQ12815 778 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 NBPF11Q86T75 865 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 CLEC10AQ8IUN9 316 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 USP40Q9NVE5 1235 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 CLIC4Q9Y696 253 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 DDX60LQ5H9U9 1706 aaKnown RBP7.24□□□□□ -1.25
CLK1-210ENST00000473565 ZBTB22O15209 634 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 FMNL1O95466 1100 aaPredicted RBP7.24□□□□□ -1.25
CLK1-210ENST00000473565 VEGFAP15692 232 aaPredicted RBP7.24□□□□□ -1.25
CLK1-210ENST00000473565 IFNAR1P17181 557 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 RASA1P20936 1047 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 RBM5P52756 815 aaKnown RBP eCLIP7.24□□□□□ -1.25
CLK1-210ENST00000473565 CATIPQ7Z7H3 387 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 ZFPM1Q8IX07 1006 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 CRACR2BQ8N4Y2 399 aaPredicted RBP7.24□□□□□ -1.25
CLK1-210ENST00000473565 BICD2Q8TD16 824 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 SCAND2PQ9GZW5 306 aaPredicted RBP7.24□□□□□ -1.25
CLK1-210ENST00000473565 STX8Q9UNK0 236 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 QSER1Q2KHR3 1735 aa7.24□□□□□ -1.25
CLK1-210ENST00000473565 GOLGA6L4A6NEF3 574 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 FAM196BA6NMK8 535 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 YDJCA8MPS7 323 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 PPIP5K2O43314 1243 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 WDHD1O75717 1129 aaPredicted RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 TSPY3P0CV98 308 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 TSPY8P0CW00 308 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 CDK8P49336 464 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 TCP10Q12799 353 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 L1TD1Q5T7N2 865 aaKnown RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 CPVLQ9H3G5 476 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 ZNF277Q9NRM2 450 aaPredicted RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 C10orf71Q711Q0 1435 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 PDIA4P13667 645 aaKnown RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 KCNA3P22001 575 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 CRKP46108 304 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 CSPP1Q1MSJ5 1256 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 DACT2Q5SW24 774 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 MYSM1Q5VVJ2 828 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 APOBEC3HQ6NTF7 200 aaKnown RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 CDC42EP5Q6NZY7 148 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 ZNF444Q8N0Y2 327 aaPredicted RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 TMTC2Q8N394 836 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 OXER1Q8TDS5 423 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 FAM163AQ96GL9 167 aaPredicted RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 DACT1Q9NYF0 836 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 VPS54Q9P1Q0 977 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 V9GY48 417 aaPredicted RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 DLEC1Q9Y238 1755 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 ELP1O95163 1332 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 BTBD18B2RXH4 712 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 NR1I2O75469 434 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 RAD17O75943 681 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 MRE11P49959 708 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 EIF6P56537 245 aaKnown RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 NR5A1Q13285 461 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 GNL2Q13823 731 aaKnown RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 CCDC183Q5T5S1 534 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 LRSAM1Q6UWE0 723 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 PODNQ7Z5L7 613 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 SLF2Q8IX21 1173 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 TRIM22Q8IYM9 498 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 STAG2Q8N3U4 1231 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 SRBD1Q8N5C6 995 aaKnown RBP7.23□□□□□ -1.25
CLK1-210ENST00000473565 TTLL6Q8N841 843 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 CFAP45Q9UL16 551 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 SNED1Q8TER0 1413 aa7.23□□□□□ -1.25
CLK1-210ENST00000473565 FAM205CA6NFA0 338 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 GOLGA8HP0CJ92 632 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 PCP11498 1178 aaKnown RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 PLCG2P16885 1265 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 ATP2B1P20020 1258 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 ME1P48163 572 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 FUT2Q10981 343 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 SHROOM1Q2M3G4 852 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 CKAP2LQ8IYA6 745 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 TEKT1Q969V4 418 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 GOLPH3LQ9H4A5 285 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 COL4A5P29400 1685 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 NID2Q14112 1375 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 ROBO3Q96MS0 1386 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 PSDA5PKW4 1024 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 ADAMTS3O15072 1205 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 MARCKSP29966 332 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 KIAA2012Q0VF49 1180 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 TRIM29Q14134 588 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 R3HDM1Q15032 1099 aaKnown RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 PKN1Q16512 942 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 TMED8Q6PL24 325 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 TMTC3Q6ZXV5 915 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 PNMA1Q8ND90 353 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 SYAP1Q96A49 352 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 ZNF396Q96N95 335 aaPredicted RBP7.22□□□□□ -1.25
CLK1-210ENST00000473565 MTA3Q9BTC8 594 aa7.22□□□□□ -1.25
CLK1-210ENST00000473565 KAT14Q9H8E8 782 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms