RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 MIPEPQ99797 713 aa7.49□□□□□ -1.21
CNOT4-209ENST00000473470 LEFTY1O75610 366 aa7.48□□□□□ -1.21
CNOT4-209ENST00000473470 WNT11O96014 354 aa7.48□□□□□ -1.21
CNOT4-209ENST00000473470 YARSP54577 528 aaKnown RBP7.48□□□□□ -1.21
CNOT4-209ENST00000473470 PRAMEF13Q5VWM6 474 aa7.48□□□□□ -1.21
CNOT4-209ENST00000473470 C22orf34Q6ZV56 151 aa7.48□□□□□ -1.21
CNOT4-209ENST00000473470 TMEM87BQ96K49 555 aa7.48□□□□□ -1.21
CNOT4-209ENST00000473470 ZC3H7BQ9UGR2 993 aaKnown RBP7.48□□□□□ -1.21
CNOT4-209ENST00000473470 CCDC180Q9P1Z9 1646 aa7.48□□□□□ -1.21
CNOT4-209ENST00000473470 BICRAQ9NZM4 1560 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 MINDY4BA8MYZ0 360 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 PLCG1P19174 1290 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 GARTP22102 1010 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 CYP7A1P22680 504 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 ETV3P41162 512 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 CLCN7P51798 805 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 TMEM201Q5SNT2 666 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 XP32Q5T750 250 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 RNF34Q969K3 372 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 BACH2Q9BYV9 841 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 TPX2Q9ULW0 747 aaKnown RBP7.47□□□□□ -1.21
CNOT4-209ENST00000473470 PRR36Q9H6K5 1346 aa7.47□□□□□ -1.21
CNOT4-209ENST00000473470 TMEM265A0A087WTH1 108 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 MED26O95402 600 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 NKG7Q16617 165 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 LETMD1Q6P1Q0 360 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 USP48Q86UV5 1035 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 KIAA0825Q8IV33 1275 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.22
CNOT4-209ENST00000473470 COPRSQ9NQ92 184 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 TJP2Q9UDY2 1190 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 CCDC39Q9UFE4 941 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 SLC5A6Q9Y289 635 aa7.46□□□□□ -1.22
CNOT4-209ENST00000473470 GP2P55259 537 aaKnown RBP7.45□□□□□ -1.22
CNOT4-209ENST00000473470 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
CNOT4-209ENST00000473470 MCATQ8IVS2 390 aaKnown RBP7.45□□□□□ -1.22
CNOT4-209ENST00000473470 FAM181AQ8N9Y4 354 aa7.45□□□□□ -1.22
CNOT4-209ENST00000473470 FAM13CQ8NE31 585 aa7.45□□□□□ -1.22
CNOT4-209ENST00000473470 FLCNQ8NFG4 579 aa7.45□□□□□ -1.22
CNOT4-209ENST00000473470 CYB5D2Q8WUJ1 264 aa7.45□□□□□ -1.22
CNOT4-209ENST00000473470 ACSF2Q96CM8 615 aaPredicted RBP7.45□□□□□ -1.22
CNOT4-209ENST00000473470 HRASLS5Q96KN8 279 aa7.45□□□□□ -1.22
CNOT4-209ENST00000473470 GREM1O60565 184 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 SLITRK5O94991 958 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 HTR3BO95264 441 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 EOMESO95936 686 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 ZNF865P0CJ78 1059 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-209ENST00000473470 ITIH2P19823 946 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 KIR3DL1P43629 444 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 OXCT1P55809 520 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 PRKCQQ04759 706 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 APOBRQ0VD83 1088 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 FBXL19Q6PCT2 694 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 SLFN12Q8IYM2 578 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 PLD6Q8N2A8 252 aaKnown RBP7.44□□□□□ -1.22
CNOT4-209ENST00000473470 MFSD4AQ8N468 514 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 ZNF296Q8WUU4 475 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-209ENST00000473470 SPON2Q9BUD6 331 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 REV1Q9UBZ9 1251 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
CNOT4-209ENST00000473470 LDLRAD1Q5T700 205 aa7.43□□□□□ -1.22
CNOT4-209ENST00000473470 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
CNOT4-209ENST00000473470 TNKS2Q9H2K2 1166 aa7.43□□□□□ -1.22
CNOT4-209ENST00000473470 ADAMTS1Q9UHI8 967 aa7.43□□□□□ -1.22
CNOT4-209ENST00000473470 CUX2O14529 1486 aa7.43□□□□□ -1.22
CNOT4-209ENST00000473470 NPM2Q86SE8 214 aaKnown RBP7.42□□□□□ -1.22
CNOT4-209ENST00000473470 REXO1Q8N1G1 1221 aaKnown RBP7.42□□□□□ -1.22
CNOT4-209ENST00000473470 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
CNOT4-209ENST00000473470 HEXIM2Q96MH2 286 aaKnown RBP7.42□□□□□ -1.22
CNOT4-209ENST00000473470 DPH2Q9BQC3 489 aaPredicted RBP7.42□□□□□ -1.22
CNOT4-209ENST00000473470 KLHL3Q9UH77 587 aa7.42□□□□□ -1.22
CNOT4-209ENST00000473470 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
CNOT4-209ENST00000473470 POLR3KQ9Y2Y1 108 aaPredicted RBP7.42□□□□□ -1.22
CNOT4-209ENST00000473470 CORINQ9Y5Q5 1042 aa7.42□□□□□ -1.22
CNOT4-209ENST00000473470 FAM155AB1AL88 458 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-209ENST00000473470 TLR3O15455 904 aaKnown RBP7.41□□□□□ -1.22
CNOT4-209ENST00000473470 ZNF165P49910 485 aa7.41□□□□□ -1.22
CNOT4-209ENST00000473470 FAM214BQ7L5A3 538 aa7.41□□□□□ -1.22
CNOT4-209ENST00000473470 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
CNOT4-209ENST00000473470 TP53INP2Q8IXH6 220 aa7.41□□□□□ -1.22
CNOT4-209ENST00000473470 BCL7CQ8WUZ0 217 aaPredicted RBP7.41□□□□□ -1.22
CNOT4-209ENST00000473470 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
CNOT4-209ENST00000473470 SPATA32Q96LK8 384 aa7.41□□□□□ -1.22
CNOT4-209ENST00000473470 GRIN3BO60391 1043 aa7.4□□□□□ -1.22
CNOT4-209ENST00000473470 ATE1O95260 518 aa7.4□□□□□ -1.22
CNOT4-209ENST00000473470 IMPDH2P12268 514 aa7.4□□□□□ -1.22
CNOT4-209ENST00000473470 CHMP4BP1P59074 171 aa7.4□□□□□ -1.22
CNOT4-209ENST00000473470 ANGEL2Q5VTE6 544 aaKnown RBP7.4□□□□□ -1.22
CNOT4-209ENST00000473470 FBXO27Q8NI29 283 aa7.4□□□□□ -1.22
CNOT4-209ENST00000473470 GMIPQ9P107 970 aa7.4□□□□□ -1.22
CNOT4-209ENST00000473470 THAP5Q7Z6K1 395 aa7.39□□□□□ -1.23
CNOT4-209ENST00000473470 PHACTR4Q8IZ21 702 aa7.39□□□□□ -1.23
CNOT4-209ENST00000473470 ZNF654Q8IZM8 581 aa7.39□□□□□ -1.23
CNOT4-209ENST00000473470 DNAJB8Q8NHS0 232 aa7.39□□□□□ -1.23
CNOT4-209ENST00000473470 PIWIL2Q8TC59 973 aaKnown RBP7.39□□□□□ -1.23
CNOT4-209ENST00000473470 NKD1Q969G9 470 aa7.39□□□□□ -1.23
CNOT4-209ENST00000473470 BRMS1Q9HCU9 246 aa7.39□□□□□ -1.23
CNOT4-209ENST00000473470 UBP1Q9NZI7 540 aa7.39□□□□□ -1.23
CNOT4-209ENST00000473470 PCDHB14Q9Y5E9 798 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms