RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 CEP131Q9UPN4 1083 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 SRPRBQ9Y5M8 271 aaKnown RBP16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
NHLRC3-204ENST00000473371 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 CEP112Q8N8E3 955 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 ZBTB38Q8NAP3 1195 aaPredicted RBP16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 CSRNP2Q9H175 543 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 CDC23Q9UJX2 597 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 TRIM28Q13263 835 aaKnown RBP16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 ZNF569Q5MCW4 686 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 ZNF512BQ96KM6 892 aaPredicted RBP16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 NAA15Q9BXJ9 866 aaKnown RBP16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 GREM2Q9H772 168 aa16.21■□□□□ 0.19
NHLRC3-204ENST00000473371 H3BQF6 201 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 PHKA1P46020 1223 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 LMAN1P49257 510 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 ALX1Q15699 326 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 ZSCAN26Q16670 478 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 KIF4BQ2VIQ3 1234 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 CMTR1Q8N1G2 835 aaKnown RBP16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 ZKSCAN3Q9BRR0 538 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 TSPYL1Q9H0U9 437 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 ADAM21Q9UKJ8 722 aa16.21■□□□□ 0.18
NHLRC3-204ENST00000473371 A0A0U1RQJ8 604 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 KDM4FA0A1W2PPD8 638 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 PATL2C9JE40 543 aaKnown RBP16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 AFMP43652 599 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 SPATA1Q5VX52 437 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 ATRIPQ8WXE1 791 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 EXOC4Q96A65 974 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 CNNM2Q9H8M5 875 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 EPB41L4AQ9HCS5 686 aaPredicted RBP16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 KCPQ6ZWJ8 1503 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 DEXIO95424 95 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 MCM6Q14566 821 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 TTLL11Q8NHH1 800 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 KRT23Q9C075 422 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
NHLRC3-204ENST00000473371 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 MYO5AQ9Y4I1 1855 aaKnown RBP16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 TCRBV5S4A2TA0A5A2 114 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 MAP2K7O14733 419 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 MBD4O95243 580 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 WTAPQ15007 396 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 FILIP1LQ4L180 1135 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 GPTP24298 496 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 SART3Q15020 963 aaKnown RBP16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 SPATA20Q8TB22 786 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 ANKZF1Q9H8Y5 726 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 ERLIN1O75477 346 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 UQCRFS1P1P0C7P4 283 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 HDXQ7Z353 690 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 PDE11AQ9HCR9 933 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 CWC15Q9P013 229 aaKnown RBP16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 TACC3Q9Y6A5 838 aa16.19■□□□□ 0.18
NHLRC3-204ENST00000473371 ERICH2A1L162 156 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 CTAGE9A4FU28 777 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 MFAP3LO75121 409 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 CASP14P31944 242 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 BEND6Q5SZJ8 279 aaPredicted RBP16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 MAGEB6Q8N7X4 407 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 HNRNPLLQ8WVV9 542 aaKnown RBP16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 CTAGE1Q96RT6 745 aa16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 ADD3Q9UEY8 706 aaKnown RBP16.18■□□□□ 0.18
NHLRC3-204ENST00000473371 PDE8BO95263 885 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 ATF3P18847 181 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 CASP1P29466 404 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 CT47A1Q5JQC4 288 aaPredicted RBP16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 RASGRP2Q7LDG7 609 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 PSD3Q9NYI0 1048 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 VPS18Q9P253 973 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 FEZ2Q9UHY8 353 aaPredicted RBP16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 CCDC196A0A1B0GTZ2 297 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 TUBB2AQ13885 445 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 SLC35F6Q8N357 371 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 ZBTB9Q96C00 473 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 PNKPQ96T60 521 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 TUBB2BQ9BVA1 445 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 ARID4AP29374 1257 aaPredicted RBP16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 TDO2P48775 406 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 CNGA4Q8IV77 575 aa16.17■□□□□ 0.18
NHLRC3-204ENST00000473371 VGLL2Q8N8G2 317 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms