RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 C1QTNF12Q5T7M4 302 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 SUGP1Q8IWZ8 645 aaKnown RBP7.29□□□□□ -1.24
RTF1-203ENST00000473214 MSL3Q8N5Y2 521 aaKnown RBP7.29□□□□□ -1.24
RTF1-203ENST00000473214 FBF1Q8TES7 1133 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 TNFRSF25Q93038 417 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 L3MBTL2Q969R5 705 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 RBSNQ9H1K0 784 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 LUZP4Q9P127 313 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 ISY1Q9ULR0 285 aaKnown RBP7.29□□□□□ -1.24
RTF1-203ENST00000473214 GTF2A1LQ9UNN4 478 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 EFR3BQ9Y2G0 817 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 STARD13Q9Y3M8 1113 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 GPC6Q9Y625 555 aaPredicted RBP7.29□□□□□ -1.24
RTF1-203ENST00000473214 TNIKQ9UKE5 1360 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 BCORL1Q5H9F3 1711 aa7.29□□□□□ -1.24
RTF1-203ENST00000473214 UACAQ9BZF9 1416 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 DISP1Q96F81 1524 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 M0R082 166 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 SCP2P22307 547 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 EPHA4P54764 986 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 NFKB2Q00653 900 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 FAM83BQ5T0W9 1011 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 ALKBH2Q6NS38 261 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 LRRC69Q6ZNQ3 347 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 DDX46Q7L014 1031 aaKnown RBP7.28□□□□□ -1.24
RTF1-203ENST00000473214 ZSCAN30Q86W11 494 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 GPR101Q96P66 508 aaPredicted RBP7.28□□□□□ -1.24
RTF1-203ENST00000473214 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
RTF1-203ENST00000473214 SELENOOQ9BVL4 669 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 CCDC113Q9H0I3 377 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 DNAJC25Q9H1X3 360 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 STRIP2Q9ULQ0 834 aa7.28□□□□□ -1.24
RTF1-203ENST00000473214 RIMS1Q86UR5 1692 aaKnown RBP7.28□□□□□ -1.24
RTF1-203ENST00000473214 SIGLEC1Q9BZZ2 1709 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 FAM229AH3BQW9 127 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 NBPF7P0C2Y1 421 aaPredicted RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 RBP3P10745 1247 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 DEKP35659 375 aaKnown RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 SFSWAPQ12872 951 aaKnown RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 SETDB1Q15047 1291 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 TOMM20Q15388 145 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 TBC1D10BQ4KMP7 808 aaPredicted RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 CCDC92Q53HC0 331 aaPredicted RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 MICALL1Q8N3F8 863 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 PPHLN1Q8NEY8 458 aaKnown RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 CPLX3Q8WVH0 158 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 ANAPC16Q96DE5 110 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 SLC30A3Q99726 388 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 SPON2Q9BUD6 331 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 CHMP4BQ9H444 224 aaKnown RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 NGRNQ9NPE2 291 aaKnown RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 COPRSQ9NQ92 184 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 ZNF358Q9NW07 568 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 CWC25Q9NXE8 425 aaPredicted RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 CLIC5Q9NZA1 410 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 FEZ2Q9UHY8 353 aaPredicted RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 NOB1Q9ULX3 412 aaKnown RBP7.27□□□□□ -1.25
RTF1-203ENST00000473214 PLAAQ9Y263 795 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 CD2APQ9Y5K6 639 aa7.27□□□□□ -1.25
RTF1-203ENST00000473214 WDR7Q9Y4E6 1490 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 USP31Q70CQ4 1352 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 BTBD11A6QL63 1104 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 PRRT4C9JH25 899 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 AKAP10O43572 662 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 ASMTLO95671 621 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 HSP90AB1P08238 724 aaKnown RBP7.26□□□□□ -1.25
RTF1-203ENST00000473214 FAM200BP0CF97 657 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 SRGNP10124 158 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 ST13P50502 369 aaKnown RBP7.26□□□□□ -1.25
RTF1-203ENST00000473214 GUCY2FP51841 1108 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 MLC1Q15049 377 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 KRTAP19-1Q8IUB9 90 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 KIAA0825Q8IV33 1275 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
RTF1-203ENST00000473214 RSPH1Q8WYR4 309 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 ALDH8A1Q9H2A2 487 aaPredicted RBP7.26□□□□□ -1.25
RTF1-203ENST00000473214 FAM13BQ9NYF5 915 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 PRKAG3Q9UGI9 489 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 DIS3Q9Y2L1 958 aaKnown RBP7.26□□□□□ -1.25
RTF1-203ENST00000473214 CHMP3Q9Y3E7 222 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 MAGI3Q5TCQ9 1506 aa7.26□□□□□ -1.25
RTF1-203ENST00000473214 FRMPD1Q5SYB0 1578 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 PRSS47A8MTI9 375 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 F2P00734 622 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 ALBP02768 609 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 MYCLP1P12525 358 aaPredicted RBP7.25□□□□□ -1.25
RTF1-203ENST00000473214 NID1P14543 1247 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 NEK2P51955 445 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 NEK3P51956 506 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 TRIM28Q13263 835 aaKnown RBP7.25□□□□□ -1.25
RTF1-203ENST00000473214 CDC37Q16543 378 aaPredicted RBP7.25□□□□□ -1.25
RTF1-203ENST00000473214 C2orf27AQ580R0 203 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 MEI1Q5TIA1 1274 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 IL31Q6EBC2 164 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 C8orf86Q6ZUL3 223 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 ERMP1Q7Z2K6 904 aa7.25□□□□□ -1.25
RTF1-203ENST00000473214 ZNF354CQ86Y25 554 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms