RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZRANB2O95218 330 aaKnown RBP eCLIP24.15■■□□□ 1.463e-6■■■■■ 27.8
COL18A1-207ENST00000473212 WDR24Q96S15 920 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 NOL10Q9BSC4 688 aaKnown RBP24.15■■□□□ 1.46
COL18A1-207ENST00000473212 EPC1Q9H2F5 836 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 HOOK1Q9UJC3 728 aaKnown RBP24.15■■□□□ 1.46
COL18A1-207ENST00000473212 BAZ2BQ9UIF8 2168 aaKnown RBP24.15■■□□□ 1.46
COL18A1-207ENST00000473212 EFCAB8A8MWE9 144 aa24.14■■□□□ 1.46
COL18A1-207ENST00000473212 PRDM1O75626 825 aa24.14■■□□□ 1.46
COL18A1-207ENST00000473212 EVX2Q03828 476 aa24.14■■□□□ 1.46
COL18A1-207ENST00000473212 TOGARAM2Q6ZUX3 1019 aa24.14■■□□□ 1.46
COL18A1-207ENST00000473212 CABP5Q9NP86 173 aa24.14■■□□□ 1.46
COL18A1-207ENST00000473212 GNG11P61952 73 aa24.14■■□□□ 1.45
COL18A1-207ENST00000473212 SAFBQ15424 915 aaKnown RBP eCLIP24.14■■□□□ 1.45
COL18A1-207ENST00000473212 NOM1Q5C9Z4 860 aaKnown RBP24.14■■□□□ 1.45
COL18A1-207ENST00000473212 CRACR2BQ8N4Y2 399 aaPredicted RBP24.14■■□□□ 1.45
COL18A1-207ENST00000473212 TC2NQ8N9U0 490 aa24.14■■□□□ 1.45
COL18A1-207ENST00000473212 SAMSN1Q9NSI8 373 aaKnown RBP24.14■■□□□ 1.45
COL18A1-207ENST00000473212 ERICH4A6NGS2 130 aa24.13■■□□□ 1.45
COL18A1-207ENST00000473212 PTPREP23469 700 aa24.13■■□□□ 1.45
COL18A1-207ENST00000473212 CASQ1P31415 396 aa24.13■■□□□ 1.45
COL18A1-207ENST00000473212 A0A087X0B3 334 aa24.13■■□□□ 1.45
COL18A1-207ENST00000473212 SEC31AO94979 1220 aaKnown RBP24.13■■□□□ 1.45
COL18A1-207ENST00000473212 ZNF18P17022 549 aa24.13■■□□□ 1.45
COL18A1-207ENST00000473212 TAF3Q5VWG9 929 aa24.13■■□□□ 1.45
COL18A1-207ENST00000473212 SPECC1LQ69YQ0 1117 aa24.13■■□□□ 1.45
COL18A1-207ENST00000473212 ELOA2Q8IYF1 753 aaPredicted RBP24.13■■□□□ 1.45
COL18A1-207ENST00000473212 KDM4FA0A1W2PPD8 638 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 ZNF654Q8IZM8 581 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 STAG1Q8WVM7 1258 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 WASF1Q92558 559 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 SMARCE1Q969G3 411 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 CSRNP2Q9H175 543 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 VPS54Q9P1Q0 977 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 LRP2BPQ9P2M1 347 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 ABCF2Q9UG63 623 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 STX10O60499 249 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 KRT23Q9C075 422 aa24.12■■□□□ 1.45
COL18A1-207ENST00000473212 TRIM22Q8IYM9 498 aa24.11■■□□□ 1.45
COL18A1-207ENST00000473212 MLKLQ8NB16 471 aa24.11■■□□□ 1.45
COL18A1-207ENST00000473212 FANCBQ8NB91 859 aa24.11■■□□□ 1.45
COL18A1-207ENST00000473212 SARSP49591 514 aaKnown RBP24.11■■□□□ 1.45
COL18A1-207ENST00000473212 MORC3Q14149 939 aa24.11■■□□□ 1.45
COL18A1-207ENST00000473212 NT5DC1Q5TFE4 455 aa24.11■■□□□ 1.45
COL18A1-207ENST00000473212 ENOX1Q8TC92 643 aaKnown RBP24.11■■□□□ 1.45
COL18A1-207ENST00000473212 CNNM2Q9H8M5 875 aa24.11■■□□□ 1.45
COL18A1-207ENST00000473212 DOCK2Q92608 1830 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 COBLO75128 1261 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 IL6STP40189 918 aaPredicted RBP24.1■■□□□ 1.45
COL18A1-207ENST00000473212 EPSTI1Q96J88 318 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 DESI2Q9BSY9 194 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 LRP5O75197 1615 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 ERVV-1B6SEH8 477 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 MAP3K9P80192 1104 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 PPARAQ07869 468 aa24.1■■□□□ 1.45
COL18A1-207ENST00000473212 ACTN4O43707 911 aaKnown RBP24.09■■□□□ 1.45
COL18A1-207ENST00000473212 CYP7A1P22680 504 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 RILPL1Q5EBL4 403 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 ACSBG1Q96GR2 724 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 DACH1Q9UI36 760 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 GOLGA6L9A6NEM1 432 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 TPM1P09493 284 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 AFMP43652 599 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 GYG1P46976 350 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 SMYD4Q8IYR2 804 aaPredicted RBP24.09■■□□□ 1.45
COL18A1-207ENST00000473212 FOXP1Q9H334 677 aaPredicted RBP24.09■■□□□ 1.45
COL18A1-207ENST00000473212 TNKSO95271 1327 aa24.09■■□□□ 1.45
COL18A1-207ENST00000473212 DEXIO95424 95 aa24.08■■□□□ 1.45
COL18A1-207ENST00000473212 STX17P56962 302 aa24.08■■□□□ 1.45
COL18A1-207ENST00000473212 CHRNDQ07001 517 aa24.08■■□□□ 1.45
COL18A1-207ENST00000473212 MTF1Q14872 753 aa24.08■■□□□ 1.45
COL18A1-207ENST00000473212 INTS5Q6P9B9 1019 aaKnown RBP24.08■■□□□ 1.45
COL18A1-207ENST00000473212 DHX58Q96C10 678 aa24.08■■□□□ 1.45
COL18A1-207ENST00000473212 RAI14Q9P0K7 980 aa24.08■■□□□ 1.45
COL18A1-207ENST00000473212 MYH2Q9UKX2 1941 aa24.08■■□□□ 1.44
COL18A1-207ENST00000473212 CCDC66A2RUB6 948 aa24.08■■□□□ 1.44
COL18A1-207ENST00000473212 PLEKHA8P1O95397 391 aa24.08■■□□□ 1.44
COL18A1-207ENST00000473212 EIF5P55010 431 aaKnown RBP24.08■■□□□ 1.44
COL18A1-207ENST00000473212 PPP2R3AQ06190 1150 aa24.08■■□□□ 1.44
COL18A1-207ENST00000473212 NUTM2AQ8IVF1 878 aaPredicted RBP24.08■■□□□ 1.44
COL18A1-207ENST00000473212 STAMQ92783 540 aa24.08■■□□□ 1.44
COL18A1-207ENST00000473212 NACAP1Q9BZK3 213 aa24.08■■□□□ 1.44
COL18A1-207ENST00000473212 MRFAP1Q9Y605 127 aa24.08■■□□□ 1.44
COL18A1-207ENST00000473212 A0A0U1RQJ8 604 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 ERICH2A1L162 156 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 DYNLL1P63167 89 aaKnown RBP24.07■■□□□ 1.44
COL18A1-207ENST00000473212 KARSQ15046 597 aaKnown RBP24.07■■□□□ 1.44
COL18A1-207ENST00000473212 TEX35Q5T0J7 233 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 KLHL10Q6JEL2 608 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 ATRIPQ8WXE1 791 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 KIFC2Q96AC6 838 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 ARAP2Q8WZ64 1704 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 NHSL1Q5SYE7 1610 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 SART3Q15020 963 aaKnown RBP24.07■■□□□ 1.44
COL18A1-207ENST00000473212 UBAC1Q9BSL1 405 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 SRPRBQ9Y5M8 271 aaKnown RBP24.07■■□□□ 1.44
COL18A1-207ENST00000473212 TIAM2Q8IVF5 1701 aa24.07■■□□□ 1.44
COL18A1-207ENST00000473212 TEX33O43247 280 aa24.06■■□□□ 1.44
COL18A1-207ENST00000473212 CD44P16070 742 aaKnown RBP24.06■■□□□ 1.44
COL18A1-207ENST00000473212 FAM193AP78312 1265 aa24.06■■□□□ 1.44
COL18A1-207ENST00000473212 NR1I3Q14994 352 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms